Solanum stenotomum: 125871703
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Entry
125871703 CDS
T08385
Name
(RefSeq) regulatory-associated protein of TOR 1-like
KO
K07204
regulatory associated protein of mTOR
Organism
sstn
Solanum stenotomum
Pathway
sstn04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
125871703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125871703
Membrane trafficking [BR:
sstn04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
125871703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
HEAT
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
PEP5_VPS11_N
Beta-prop_EML
HEAT_2
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
125871703
NCBI-ProteinID:
XP_049408308
LinkDB
All DBs
Position
7:45894782..45912484
Genome browser
AA seq
1353 aa
AA seq
DB search
MALGDLMASRLSQSSAALDEFGHEDGERNNVRDLDTASSSYVGGGVADNAMTTTSMAYFP
QTIVLCELRHDRFEDSVPSGPSDTGLVSKWRPRDRMKTGCVALVLCLNISVDPPDVIKIS
PCARMECWVDPFSMAPQKALETIGRTLNQQYERWQPRAKYKISLDPTVDEIKKLCTTCRK
YAKSERVLFHYNGHGVPKPTANGEIWLFNKSYTQYIPLPISDLDSWLKTPSIYVFDCSAA
GMIVNAFIELQDWTASGSSATSTRDSILLAACEAHETLPQSAEFPADVFTSCLTTPIKMA
LRWFCTRSLLHESLDYSLIDRIPGRQTDRKTLLGELNWIFTAVTDTIAWNVLPHDLFQRL
FRQDLLVASLFRNFLLAERIMRSANCSPISYPMLPPTHQHHMWDAWDMAAEICLSQLPNL
VEDPNAEFQPSPFFTEQLTAFEVWLDHGSKDKKPPEQLPIVLQVLLSQCHRFRALVLLGR
FLDMGPWAVDLALSVGIFPYVLKLLQTTTPDLRQILVFIWTKILALDKSCQVDLVKDGGH
TYFIRFLDSVEAYPEQRAMAAFVLAVIVDGHRRGQEACTEAGLIHVCLKHLQGSTPNEAQ
TEPLFLQWLCLCLGKLWEDFTEAQVLGLQADAPAIFAPLLSEPQPEVRAAATFALGTLLD
VGFDSARDGVGGDEDCDDEEKVRTEVSIIKSLLSVASDGSPLVRVEVAVALARFAFGHNK
HLKSVAAAYWKPQANSLLTSLPSFAVKSSCSGYTTPTHSISHGSRVPSPIAPLLRVGGDS
QSISRDGRVSTSSPLATPGVIHGSPLSDDSSQLSDPGILNDAVTNGVVNHTRSRPLDNAL
YSQCVLAMCALAKDPSPRIAGLGRRVLSIIGIEQVVAKSVKSTGESTTVPNTGYAGLARS
SSWFDMNGGHLPLTFRTPPVSPPRPSYLTGMRRVCSLEFRPHLMHSQDSGLADPLLGSAG
SSGPSERSFLPQPTIYNWSCGHFSKPLLTAADDSEEMVARREEKEKLALDLIAKCQHSSV
SKLHNQIASWDTKFEIGTKTALLQPFSPIVIAADESERIRVWNYEEATLLNSFDNHSYPD
KGISKLCLVNELDESLLLVASSDGNIRIWKDYTVRGRQRLVSAFSSIQGHRPGVRSVNAV
VDWQQQSGYLFSSGEVSSIMAWDLDKEQLVNTIPTSSDCSISALSASQVHAGHFAAGFVD
GCVKLFDIRMPELLVCASRPHTQRVERVVGIGFQPGLEPAKIVSASQAGDIQFLDMRNLK
EAYLTIDAHRGSLTALAVHRHAPLIASGSAKQLIKVFNLEGEQLGTIRYLSTFMAQKIGS
VRCLTFHPYQVLLAAGAADSCVSIYADEIAQTR
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggggatttgatggcgtcgaggttgtcacaatcatcagctgctttggatgag
tttggacatgaggatggggaaaggaataatgttagagatttggacactgctagtagtagc
tatgttggtggtggggttgctgataatgcgatgacgacaacaagtatggcttattttccg
cagacaattgtgttgtgtgagcttaggcatgatcgttttgaggattctgttccttctggt
ccatctgacactgggttggtctctaaatggcggcctagggaccgaatgaaaacaggatgt
gttgcccttgttttgtgtttaaacatcagcgttgatccacctgatgtaataaagatatct
ccttgtgctcgaatggagtgttgggttgatccattttcgatggcacctcaaaaagcactt
gagacaattgggagaactttgaaccaacaatatgagaggtggcaacctagggctaaatat
aagatttccttggatcctactgttgatgaaatcaagaagctttgcacaacttgtcgaaag
tatgctaagtcagagcgagttctattccattataatggacacggtgttcctaaacctaca
gccaatggtgaaatttggctatttaataagagttatacgcagtatattcctttgccaatc
agtgacctggattcctggttgaagacaccatcgatctatgtatttgactgctctgctgct
gggatgattgttaatgccttcatagagcttcaggactggactgcttctggttcttctgca
acttctacaagggatagtattctgcttgctgcttgtgaagcacatgagacgcttccacaa
agtgctgagtttccagccgatgtgttcacttcctgcctcacaacacccatcaaaatggca
ttgagatggttttgcactcgttcgttgcttcatgagtcgcttgattactctctgattgat
agaattcctggccggcaaactgatcggaagacacttcttggcgagctgaattggattttt
actgcagttaccgacacaattgcctggaatgttctaccacatgatctatttcagagactg
ttcaggcaagatctgttagttgctagtttgttcagaaacttcttacttgctgaaagaatc
atgcgctctgcaaattgttcaccaatttcatacccgatgctaccacctactcatcagcac
catatgtgggatgcatgggacatggcagcagaaatctgtctttcacagcttccaaattta
gttgaggatcccaatgcagaatttcagccaagtccatttttcacagagcagttgacagct
tttgaagtatggcttgaccatggatcaaaggataaaaagcctccagagcagctgcccata
gtgttacaggtgttacttagtcaatgccacaggtttcgtgcacttgtacttcttggaaga
tttctcgatatgggaccttgggctgttgatctggccttgtctgttggaatatttccttat
gttctaaaacttttgcaaaccaccactccagatcttagacaaattcttgtctttatctgg
acgaagatccttgcactcgataagtcttgtcaggttgaccttgtaaaggatggaggacat
acatatttcattagatttcttgacagtgtggaggcttatccagagcaaagggcaatggct
gcatttgttttagcagtcattgtggatggtcacagacggggtcaggaggcctgtactgaa
gcgggtcttatacatgtctgcttgaagcatcttcagggatcgacgcctaatgaggcacaa
actgaaccactttttcttcaatggctgtgcctttgtctgggaaaactgtgggaggatttc
acagaggctcaagtactaggtttgcaggcagatgcaccagcaatatttgcgcctctcctg
tctgagccccaacctgaggtgcgtgctgcagctacttttgctctagggactttacttgat
gttggatttgactcagctagggatggtgttggaggagatgaagactgtgatgatgaggag
aaggttaggactgaagtcagtataattaagagccttttaagtgttgcttctgatggaagc
cctttggttcgagtggaggttgctgtagctttggcacgttttgcctttgggcataacaag
catctgaagtcagtagccgctgcatattggaagcctcaggctaattccttgctaacttcc
ttgccttctttcgcggtcaagagttcttgtagtgggtatacaaccccgactcacagtatt
tcacatggaagtagagttccgtctcctattgctcctttattgagagtggggggtgacagt
cagtccatatctcgggatgggagagtctcaaccagcagcccccttgcaacacccggcgtt
atacatggatcacctttatctgatgattcctctcaactttctgatcccggaatcttgaat
gatgctgttaccaatggtgttgtaaatcatacaagatcaaggcctctagacaatgcactc
tattctcagtgtgtactggctatgtgtgccttggcaaaggatccgtcaccacgtattgca
ggtcttggccggagagtcctttccattatcgggattgaacaggttgttgccaaatctgtt
aagtcaactggtgaatccacaacagttccaaacactggttatgctggattggctcgatct
tcatcttggtttgatatgaacggaggacatttacctctgacttttagaactcctcctgtt
agtcccccacggcctagttacttgacaggaatgcgaagagtttgttctttagagttcagg
ccccacctaatgcactctcaagactcaggattagctgacccattgttggggtctgctgga
tcttctggaccttcagaacgcagttttcttccccaaccaactatctacaattggagttgt
ggccacttctcaaagccacttcttactgcagctgatgatagtgaagagatggttgctaga
agggaagagaaggaaaagttggcccttgacctcattgcgaagtgccaacactcttctgta
agcaaactacacaatcaaattgctagttgggatactaagtttgagattggcaccaaaact
gctttgctgcagcccttctcacctattgttattgctgcagatgagagtgaaagaatcagg
gtatggaattacgaggaggctacccttcttaatagctttgataaccacagttaccctgat
aaaggaatttcaaaactgtgtcttgtcaatgagctagatgagagtttgctccttgttgct
tcaagtgatgggaacatccggatttggaaagactatactgtaagaggccgacaaagacta
gtttctgcattctcgtccattcaaggtcacagacctggtgtccgtagtgtgaacgctgtt
gtggattggcagcagcagtctggatatctgttttcatctggtgaagtttcgtcaatcatg
gcttgggatcttgacaaagaacaacttgttaatacaattccaacatcctcagattgcagc
atctcagcattgtcagcttctcaagttcacgcaggacactttgctgctggctttgtggat
ggatgtgtcaaactatttgatattcgaatgcctgaactgcttgtttgtgcttcacggccg
cacacccaaagagtagagagagtagtggggatcggctttcaacctggacttgaaccagca
aagatcgtcagtgcctctcaagctggtgatattcagttccttgatatgagaaatctcaag
gaagcttacttaacaattgatgctcataggggatcgctaacagccctagctgttcatcgt
catgcaccccttatagcaagtggttcagctaaacagctaatcaaagtcttcaacctggaa
ggtgagcaattaggcaccataagatatttgtccaccttcatggctcagaagataggttca
gtcagatgtcttaccttccatccctatcaagtgctgcttgctgctggagcagcagattct
tgtgtttcaatctatgctgatgaaattgcccagacaagataa
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integrated database retrieval system
