Solanum stenotomum: 125872150
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Entry
125872150 CDS
T08385
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125872150
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sstn04812
]
125872150
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125872150
Cytoskeleton proteins [BR:
sstn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
125872150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
PDS5
Adaptin_N
HEAT_Maestro
INTS1_R4
MMS19_C
MMS19_N
Tti2
UTP20
TPR_TTI1_C
Dopey_N
HEAT_DAAF5
RRP12_HEAT
Rrn6_HB
SEN1_N
IcmW
Motif
Other DBs
NCBI-GeneID:
125872150
NCBI-ProteinID:
XP_049408787
LinkDB
All DBs
Position
8:complement(56130811..56148512)
Genome browser
AA seq
1433 aa
AA seq
DB search
MEAALELARAKDTKERMAGVEHLHQVLEASRKTLSPSEVTSLVDVCLDLLKDNNFRVTQG
ALQSLASAAVLSGEHLKLHFNALLPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWMHKSFRVREEFARTVTSAIGLFASTELPLQRAILPSILQMLNDPNHGVREAAL
SCIEVMYSEVGPQFRDELQRHHLPSMLLKDINVRLEKIEPKSCSIDGNSNNYSTGEVRSA
SLSSKKSSPKAKRSTREVSLFGADGDITEKPVDPIKVYSEKELVREFENIGSTLVPEKDW
SVRIAAMQRVEALVIGGAADYPCFRGLLKQLGGPLSTQLADRRSSIIKQACHLLNFLSKE
LLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVGRALPRIADSAKNDKN
AVLRARCCEYALLILEHWPDASEVQRSAELYEDLIKCCVADAMGEVRSTARTLYRMFART
WPERSRRLLSSLDPSIQRIINEEDGGIHKRHTSPSVRERSSHFSLASQTSTSHLPGYGTS
AIVSMDRSANLSSGTSLSSGLLLPQAKPVGVERSLESVLHASKQKVSAIENLLKGLDVSE
RSRSSSLDLGVDPPSSRDPPFPLAVPASTSLTNALLVDAPSAMTKGNNRNGGLVLSDIIT
QIQASKDSAKASYRSSVDHDSFSALNSYTARRASEKLQDRGLVEETEPRDIRRFMNSHVD
RQYLETSYKDAIRDSHINHVPNFQRPLLRKNTAGRTSASRRRSFDDSQFPLGDLSSYVDG
PASLNDALSEGLNSTSDWKARVAAFSYLRSLLQQGPRGIQEITQSFEKVMRLFFQHLDDP
HHKVAQAALSTLADLIPACRKPFESYVERILPHVFSRLIDPKELVRLPCSTTLEIVGKSY
GIDSLLPALLRSLDEQRSPKAKLAVIEFAIGSFNKHPSNSEGAANIGILKLWLAKLTPLV
HDKNTKLKDAAISCIISMYTHFDSIAVLNFILSLSVEEQNYLRRALKQRTPRIEVDLMNF
VQSKKERLRSKSSYDPSDVIGTSSEEGYIGISKKNNVFGRYSAGAVDTDSIRKWNSLQDP
TYMTRSIGQLSDGTQDFYHGVETGPNTDFSVTKAKDLKFGALTSSENDGYWTTLESKDNS
SNIEHTSTPHLDVNGLVDSDHLQIALDAGADNGSSSDMELNHLKLSALQINPTLETGPSI
PQILHLICNGDDGSPAANKGDALQQLVKASVANDRSIWSKYFNQILTAVLEVLDDSESWT
RELALSLILEMLKNQKNAMEDSVEIIIEKLLHVTKDDVAKVANEAENCLSTILSQYNPFR
CLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMSQLPSFLPSLFDAFGNQSADVRK
TVVFCLVDIYIMLGKAFMPYLEGLNSTQLRLVTIYANRISQARTGTPVDASHS
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgcttgagctggcgcgtgcaaaggatacgaaggagagaatggcgggtgta
gagcatcttcatcaagttctagaagcttcgagaaaaaccttatcgccttccgaagttact
tcacttgttgatgtctgcttggatcttctgaaagataacaattttagggttactcaaggt
gctcttcagtcacttgcttcagctgctgttttatccggtgagcatttgaagttacacttc
aatgcgcttttgccagctgttgttgaacgattgggcgatgcgaagcagccggttagagat
gcagctaggaggttgctgcttactttaatggaggtttcttcaccaacaattatagttgag
agggcggggtcttatgcttggatgcacaaaagctttagagttcgagaagaatttgctcgt
actgttacatcagcaattggtctttttgcatcgacagagctgccccttcaacgggctatc
cttccttcaattttgcaaatgttgaatgatcctaatcatggagtgagggaagcagcctta
tcatgtatcgaggtgatgtattcagaggttggaccccagttccgcgatgagcttcagcgc
catcatcttccttccatgttgctaaaagatattaatgtgagacttgagaagattgagccc
aaaagttgctctatagatggaaactcaaataattattcaactggtgaggtgagatctgct
agccttagttctaagaaaagcagtcctaaggcaaaacgttcaacaagagaggtgtctctc
tttggagcagatggtgatattacagaaaagcctgtcgacccaattaaagtgtattcagaa
aaagaacttgtaagggaattcgagaatattggctctacccttgtaccagaaaaagattgg
tctgtccgtatagctgctatgcagagagttgaagcacttgttattggaggtgcagctgat
tatccttgttttcgtggacttctaaagcaacttggcggccctttgagcacacagttagct
gatcggcgatccagcataatcaaacaggcatgtcatttactaaacttcttatcaaaagag
ctgttgggagattttgaggcatgtgctgagatgttcattccggttctcttcaagcttgtt
gtgataactgttcttgtgattgcagaatctgctgataactgcataaagacgatgttgcgc
aactgcaaagttggtcgggcacttcctcgtatagctgattctgcaaagaatgacaaaaat
gcagtacttcgtgcaagatgctgtgaatacgcacttctgatccttgaacattggcctgat
gcatctgaggtacaacgttcggcagagctctatgaagaccttataaaatgttgtgtagcc
gatgcaatgggtgaggtacgatcaactgcaagaactttgtacagaatgtttgcaagaacc
tggccagaacgttctaggcgtttgctgtcgtccttggatccttctatccaaaggattata
aatgaggaagatggtggtattcataaacgacacacttctccctctgttcgagagaggagt
tcacacttctcacttgcgtctcaaacatctacttcacatctacctggttatggaacatct
gctatagtttccatggacagaagtgccaatttatcttcaggaacgtccctgtcctctggg
ctgcttttgccacaagcaaaacctgtgggagtggaacgtagtctggagagtgtacttcat
gccagcaaacagaaagtttctgctatagaaaacctgctcaaaggtctagatgtatctgag
agaagtcgctcctctagtttggatctaggagttgacccgccctcgtcccgtgatccacca
ttccctcttgctgttcctgcatcaacaagtcttactaatgctttactcgttgatgcacca
tctgctatgactaaaggaaataatcgcaacggtgggttggttttgtctgatatcataact
cagatccaggcctcaaaggattcagctaaagcatcataccgaagtagtgtggatcatgat
tctttttcggcactcaactcctacactgcaagaagagcttctgaaaaactacaggataga
ggacttgttgaagagactgagccgagggatattaggcggtttatgaactcgcatgttgac
agacaatacttagagacatcgtataaagatgctattagggactcccacattaatcacgtt
cccaattttcaacgtcctctcttaagaaaaaatacagcaggaagaacgtcagctagcagg
aggaggagttttgatgacagtcaatttcctctaggagatctatctagttatgtggatggt
cctgcttcactaaatgatgcattaagtgagggtctcaattctacttcagattggaaagcc
agggttgctgcatttagctatctccggtctttgctacagcagggccctagaggtattcaa
gaaatcactcagagttttgagaaggttatgagattgtttttccagcatcttgatgatccc
catcataaagttgcacaggcagcactttcaactcttgcagatcttattcctgcttgcaga
aagccatttgaaagttacgtagagaggatcttgccacatgttttctcgcgattaattgat
cccaaagaattggtgaggctgccctgctcaactaccctagaaatagttggcaagtcatat
ggtatagattcccttttgccagctttactccgttcattagatgagcagcgttccccaaag
gccaagctcgctgtaattgagtttgcaattggctcatttaacaagcatccttcaaattct
gaaggtgctgctaacattggcatcctcaagttatggcttgctaagttgacaccattggtc
catgataagaataccaaactgaaagacgcagctatctcgtgcattatatcaatgtacaca
cactttgactctattgcagttctaaattttatccttagcttatcagttgaagaacaaaat
tacttgagacgggctcttaagcagcgcacgcctcgtatagaagtggatttgatgaatttc
gtgcagagcaagaaagaaagactacgatccaagtcttcgtatgatccatctgatgttatt
ggaacatcatctgaagagggatatattggcatttcaaagaagaataatgtgtttggaagg
tactctgctggtgcagttgatactgatagcatcagaaagtggaactctcttcaagaccca
acctatatgactaggtctattggccagttgtctgatggtactcaagacttctatcatggt
gtggaaactggtcccaacactgatttttctgttacaaaagccaaggatttgaaatttggg
gcccttacctcaagcgagaatgatggatattggacaacattggaaagcaaggacaacagc
tcaaacatagaacacacctccactcctcatctggatgtcaatgggctagttgattcagac
catctacagattgctcttgatgctggagctgataatgggtcttcatctgacatggagctt
aatcacctaaaactttctgctctccaaataaatccaactctggaaactggaccgagcatc
cctcagattcttcatttgatttgcaatggtgatgatggtagtcctgctgctaacaagggt
gatgcacttcaacaattggtcaaagcttctgttgctaatgatcgatccatctggagcaag
tacttcaatcagatattaactgctgtgcttgaggtgttagatgattctgagtcatggaca
agggaacttgccctatctctgattcttgaaatgctgaagaatcagaaaaatgctatggag
gactcagttgagatcataattgaaaagctgctccatgtgactaaggatgatgttgcaaaa
gttgcaaatgaagctgagaattgtttatctacaattttgtcccagtacaacccattcaga
tgcctaagtgttattgttcctttacttgtcaccgaagatgagaagactcttgtaacttgt
attaactgtttgacgaagcttgttggaaggctctctcaggaggagttgatgtctcagctt
ccttcattcttgccttccctgtttgatgcttttggaaaccagagtgctgatgtccgcaag
actgttgtattctgtttggttgacatatacatcatgctgggcaaagcatttatgccatac
ttggaagggctgaacagcacacagttacgattggtcaccatttatgcaaatcgaatatca
caggccagaacaggtactccggtagatgcaagccatagttag
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