Solanum stenotomum: 125872151
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Entry
125872151 CDS
T08385
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125872151
03036 Chromosome and associated proteins [BR:
sstn03036
]
125872151
Enzymes [BR:
sstn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125872151
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-60S particles
Helicases
125872151
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
125872151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
FlpD
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
125872151
NCBI-ProteinID:
XP_049408790
LinkDB
All DBs
Position
8:complement(23002422..23007633)
Genome browser
AA seq
680 aa
AA seq
DB search
MPALVVTEETMASEVSKKKMKKTPKTDLETPIDKKTKEKKSKKSKIDSGSDSEDAKRSKK
KEKKRKALDLDGEKSDTSSEICEPVDLKKNKKAKLDEEEVMVEKKVEDPNALSNFRISKP
LKEALNSKGIDALFPIQAMTFDDILDGCDLVGRARTGQGKTLAFVLPILESLTNGPTKAL
RKTGYGKAPSVLVLLPTRELALQVFADFEVYGRAVGLTSCCLYGNSPMGPQQAQLKRGVD
IVVGTPGRVKDHIERGNIDFRSLKFRVLDEVDEMLKIGFVDDVEFILGKVEDASLVQTVL
FSATLPVWVKHIASKFLKPDKKTADLVGNEKMKASKNVRHIIIPCSSSARPQLIPDIIRC
YGSGGRTIIFTETRALASELAGLLPGASALHGEIQQNQREATLKGFRSGKFMTLVATNVA
ARGLDIDDVQLIIQCEATSDVEAYIHRSGRTGRAGKSGVAVMLYDPRKSNISRIEKESGV
TFEHLSAPQPADVAKAAGKEAADIIADISDSVIPAFKDAAEELLNTSDLSPAELLAKALA
KAAGYSEIKTRSLLTSMENCVTLLLECGRPIFSPSFVYSVLRRFLPEEKVESINGLTLTA
DGKGAVFDVAAEHLDEFLSGHKTAHGVNLEVVEALPPLQEREKPRGGRFGGGGRGGGFGN
RRGGGGFSGGRGNGNYGRRW
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacttgttgtaactgaagaaacaatggcctccgaggtatccaaaaagaaaatg
aagaagacacccaaaactgatcttgaaactcctattgataagaaaaccaaagagaaaaag
tcaaaaaaatccaagattgattctgggtctgattcagaggacgcaaaaaggagtaaaaag
aaagagaaaaagcgaaaagccttggacttggatggtgagaagagtgatacgagctcagag
atatgcgagccggtagatttgaagaagaataaaaaggctaaattggacgaggaagaagtg
atggttgagaagaaagtggaggatcctaatgctttgtctaattttaggatttcaaagcct
ttaaaagaggctttgaattctaagggaatagacgcactttttcctattcaagctatgact
tttgatgatattcttgatggatgtgatttggttggtcgagctcgtactggtcagggtaaa
acgttggcctttgttttgcccattttggagtccctaacaaatggtcctactaaagcattg
cgaaaaacaggatatgggaaggctcctagtgttctggtgcttttacctactagggaattg
gcacttcaggtgtttgctgactttgaagtttatggccgagctgttgggctcacttcgtgc
tgtctgtatggaaattctcctatggggccacaacaggctcaactaaaaagaggagttgac
attgtagtgggtactcctggaagggttaaggaccacattgaaaggggaaatattgatttc
aggtctttaaagttccgtgttcttgatgaagtcgatgaaatgttaaaaattggttttgta
gatgatgtcgaatttattttaggcaaggtcgaagatgcaagcctagttcaaaccgttctt
ttcagtgccactttgccagtctgggtgaagcatattgcttctaagtttctgaaaccagat
aagaaaacggctgaccttgttggtaatgagaaaatgaaagccagtaaaaatgtgaggcat
attattattccatgctctagttctgcaagacctcagctgattcctgatatcattcggtgc
tacggcagtggaggccgcaccattatttttactgagacaagggccctagcttcagagcta
gctggcttattgcctggggcaagtgctttgcatggggagatacaacagaaccagcgtgag
gctacacttaaaggattcagatcaggaaaattcatgacattagtggccacaaatgtagca
gcccgtggattggatatcgatgatgttcagttaattatccagtgcgaagccactagtgat
gttgaagcatacattcatcgatctggaaggacaggacgggcaggaaagagtggtgtggct
gtaatgctgtatgatccaaggaagtccaacatttctagaattgaaaaagaatctggtgtg
acgtttgagcatttatctgctcctcagccagctgatgttgccaaggcagctgggaaagaa
gctgctgatataattgcggatatttccgatagtgtcatacctgcatttaaggatgctgca
gaggagcttctgaatacttctgacctatcaccagcagagttgcttgcgaaagctcttgcc
aaggctgctggctattctgagatcaagactcgatcgcttcttacttctatggagaactgt
gttactctgcttctcgagtgtgggagacccatcttctcaccttcctttgtctatagtgtc
ctgaggaggttcctgcctgaggagaaagttgaatcaatcaatggtcttactttgacagcc
gatggaaagggggcagtttttgatgtagctgctgagcacttggatgaatttctctcaggc
cacaaaactgcacatggggtaaatttagaggtagtggaagcgctgcctcctttgcaagag
agagagaagccaagaggtggaagatttggaggtggtggccgtggtggtggcttcggtaac
agaagaggcggaggtggcttttctggaggaagaggtaatggcaactatggtcgcagatgg
taa
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