Solanum stenotomum: 125872163
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Entry
125872163 CDS
T08385
Name
(RefSeq) protein argonaute 4-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125872163
03036 Chromosome and associated proteins [BR:
sstn03036
]
125872163
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125872163
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125872163
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125872163
microRNA pathway
RISC loading complex
125872163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
125872163
NCBI-ProteinID:
XP_049408805
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Position
8:complement(5199318..5208922)
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AA seq
921 aa
AA seq
DB search
MLSGKIVVMAEEENGGSTEALPPPPPVPLDFSPAQAEPEPVKKKVLRVPMARRGLGSKGQ
KIPILTNHFKVNVSNVDGHFFHYSVALFYEDGRPVEGKGIGRKVLDRVHETYDTELAGKD
FAYDGEKSLFTIGSLPRNKLEFTVVLDDITSNRNNGTNGNSSPGRHGSPPNETDRKRLRR
PYQSKTYKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQS
FFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNA
KDPFSLDWAKAKRVLKNLRVKTAPANQEFKITGLSEKPCREQTFTLKQRSKDEDGEVQTS
EVTVYDYFVNHRNIDLRYSADLPCLNVGKPKRPTYFPIELCTLVSLQRYTKALSTFQRAS
LVEKSRQKPQERMEILSNALKINNYDAEPLLRSCGVSISSNFTQVEGRVLPAPKLKAGNG
DDLFTRNGRWNFNNKRFFDPAKVERWAVVNFSARCDVRGLVRDLTRLGETKGISVEAPFE
VFEESPQLRRAPPVVRVDKMFEEIQSKLPGAPKFLLCLLPERKNCDIYGPWKRKNLADHG
IVTQCLAPGRVNDQYLTNLLLKINAKLGGLNSMLAAEVSPSIPMVSKVPTMILGMDVSHG
SPGQSDVPSIAAVVSSRQWPSISRYRASVRTQSPKVEMIDNIFKKVSDTEDDGIMRELLL
DFYVSSGKRKPEHIIVFRDGVSESQFNQVLNIELDQLIEACKFLDEKWSPKFVIIVAQKN
HHTKFFQSGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSP
DELQELVHNLSYVYQRSTTAISIVAPISYAHLAATQVGQWMKFEDASETSSSHGGLTNAG
PVTVPQLPRLQENVASSMFFC
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgctatctgggaagattgtggtaatggctgaagaagagaatggtggatccacagaggct
ctgccccctcctccccctgttccacttgatttctctccagcacaagctgaaccagagcca
gtgaagaaaaaggttttacgtgttcccatggcgagacgtggccttggaagcaagggacaa
aagatcccgatccttaccaatcactttaaagtaaacgtgtctaatgttgatggacacttc
tttcattacagtgttgccctattttatgaggatggtcgacctgtcgagggaaaaggaatt
ggcagaaaagttctggatagagtgcatgaaacatatgatacagaattggccgggaaggat
tttgcatatgatggggagaagagtttgttcaccattggttcactacctagaaataaatta
gagttcacggttgtactagatgacataacatctaatcggaacaacgggaccaatggcaac
tccagccctggcagacatggaagccctcctaatgaaactgataggaaaagattaaggcgg
ccgtaccaatctaaaacttataaggtggagattagcttcgctgccaagattccaatgcag
gcgattgcaaatgctttgcgaggtcaagagtctgagaactctcaagaagccttgcgagtt
ttggatataattttaaggcagcatgctgcaaaacagggttgtttacttgttcggcaatcc
tttttccataatgacccaaagaactttgctgatgttggaggtggtgttcttggctgccga
gggttccattcgagttttcgaaccacccagtcgggattgtctttgaacattgacgtgtct
accacaatgataatccagcctgggcctgtggttgactttctgatagcgaaccaaaatgca
aaagatcccttttcacttgattgggcgaaggcaaagcgcgtattgaagaacctgagagtg
aagactgctcccgctaaccaagaattcaaaataactggattgagcgaaaaaccttgtcgt
gagcagacgtttactctaaagcagaggagcaaagatgaggacggtgaagtgcagacttca
gaagtgacagtttatgattattttgttaatcatcgtaacatagacttgcgatattctgct
gatttgccgtgcctcaatgttggaaagcctaaacgtcccacctatttccccattgagctc
tgcactttggtctcattgcaaaggtacacaaaagccttgtccacctttcagagggcttcc
ttggtggagaagtctaggcaaaagccgcaggagagaatggaaattttgagtaatgctctc
aaaatcaacaattatgatgctgagcctctgcttcgttcttgtggtgtctcaatcagtagc
aacttcacacaggttgaagggcgtgtgctgcctgctcctaagttgaaggcaggaaatgga
gatgaccttttcacccgaaatggcaggtggaactttaataataagagattctttgatcca
gcaaaggtagagcgttgggcagttgtgaacttttctgcacgctgtgacgtccgtggccta
gtcagagatttgacaagacttggagagacgaaaggaattagtgtggaagctccatttgaa
gtgtttgaagagtctccacagcttagaagggctccacctgttgtcagagttgacaaaatg
tttgaagagatccagtcaaaacttcctggtgccccgaagtttcttctctgtcttcttcct
gagaggaaaaattgtgacatatatggaccatggaagcggaaaaatctggctgatcatggt
atagtaacccaatgcttggctcctggaagagttaatgatcagtatctcacaaaccttctc
cttaagatcaatgctaagctcggtggtttaaattctatgttagctgcggaagtttctcct
tccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggc
tctcccggccagtctgatgtcccatcaattgctgcagttgtgagttcaaggcagtggccg
tcaatatctcgttatagagcttccgtgcgcactcaatctcctaaagtagagatgattgat
aacatatttaaaaaagtttcagacactgaggatgatgggattatgagggaacttttgcta
gatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggt
gtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcc
tgcaagtttctagatgaaaagtggtcgcccaagtttgttatcattgttgctcagaaaaat
catcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattata
gataacaaagtttgtcatccaaggaacaatgacttctatctgtgtgcccacgcgggaatg
attggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacct
gatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgct
atatccattgtggctccgataagttatgcccatttggctgccacacaggtgggacaatgg
atgaaattcgaggacgcatcagagacatcgtcaagccatggtggtctgacaaatgctggt
ccagttactgttcctcagttgccccgtcttcaagagaatgttgctagttccatgttcttc
tgttga
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