Solanum stenotomum: 125872165
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Entry
125872165 CDS
T08385
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125872165
03036 Chromosome and associated proteins [BR:
sstn03036
]
125872165
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125872165
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125872165
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125872165
microRNA pathway
RISC loading complex
125872165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
125872165
NCBI-ProteinID:
XP_049408817
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Position
8:complement(5210023..5215120)
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AA seq
911 aa
AA seq
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MAKEEYGGSTEALPPPPPVPLDFSPERAEPGPVKKRLLRIPMARCGLGRKGQNIRILTNH
FKVNMSNDDGYFFHYSVALFYEDDQPVEVKGIGRKVLDRVHETYHAELAGKDFAYDGEKS
LFTIGSLPRSRFEFMVVLNDITSNRNIGTSSTGRHGSPPNEADRKRLRRPYQSKTYKVKI
SLADKIPMQEIANALQGQESENSQDALRVLDIILRQHAAKKGCLLVRQSFFHNDPKNFAD
VGGGVLSCRGFHSSFRTTQSGLSLNIDMSTTMIIQPGPVVGFLIANQNARDLVSLDWAKA
KRVLKNLRVKTTTANQEFKITGLSEKSCREQTFTLKQRSKDEDGEVQTSEVTVYDYFVNH
RNIHLKYSADLPCLNVGKPKRPTYFPIELCTLVSLQRYTKALSTFQRASLVEKSRQKPQE
RMEILSDALKINNYDAELLLRSCDVSINSNFTQVEGRVLPAPKLKAGNGVDIFAQNGRWN
FNNKRFFDPAKVEQWAVVNFSTRCNIGNLVGHLRRLGEMKGISVQASFKVFEESLHLRWA
PAVVRVDRMFEEIQSKFPDAKFLLCLLPERKTCDIYGPWKVKNMTNRDGIVTQCLAAPER
VNDQYLTNLLLKINAKLGGLNSMLAVEDSRSIPMVSKVPTMILGMDVSHGSPGQSDVPSI
AAVVSSRQWPSISHYRASVRTQSPKVEMIDNIFKKVSDTKDDGIMRELLIDFYSSSRQTK
PQHIIVFRDGVSESQFNQVLSIDLDQIIEACKLLDETWSPKFVIIVAQKNHHTKFFQSGS
PNNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDELQELVHNL
SYVYQRSTTATSIVAPIGYAHLAAAQVGQWMKFEDTSETSSSQGGLRNASPVTVPQLPRL
KKNVASSMFFC
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaagagtatggtggatccacagaggctctgccccctcctccccctgttcca
cttgatttctctccagaaagagctgaaccagggccggtgaagaaaaggttattacgtatt
cccatggctaggtgtggccttggaaggaagggacaaaatattcggatccttaccaatcac
tttaaagtgaacatgtctaatgatgacggatacttctttcattacagtgttgcactattt
tatgaggatgatcaacctgtcgaggtaaaaggaattggtagaaaagttctggatagagtg
catgaaacatatcatgcagaattggctgggaaggattttgcatatgatggggagaagagt
ttgttcaccattggttcattacctagaagtagattcgagttcatggttgtactaaatgac
ataacatctaatcggaacattggaacctccagtactggaagacatggaagtcctcctaat
gaagctgataggaaaagattaaggcggccgtaccaatctaaaacttataaagtgaagatt
agcctcgctgacaagataccgatgcaggaaattgcaaatgctttgcaaggtcaagagtct
gagaactctcaagacgccttgcgagttttggatataattttaaggcagcatgctgcaaaa
aagggttgtttacttgttcgtcaatcctttttccataatgatccaaagaattttgctgat
gttggaggtggtgttcttagctgtcgaggtttccattcaagttttcgaaccactcaatct
ggattgtctttgaacattgatatgtctaccacaatgataatccagcctgggcctgtggtt
ggctttctgatagcaaaccaaaatgcaagagatcttgtttcacttgattgggcgaaggca
aaacgcgtattgaagaatctgagagtgaagactactaccgctaaccaagaattcaaaata
actggattgagcgaaaaaagttgtcgtgagcagacgtttactctaaagcaaaggagcaaa
gatgaagatggtgaagtgcaaacttcagaagtgacagtttatgattactttgttaatcat
cgtaacatacacttgaaatattctgctgatttaccgtgcctcaatgttggaaagcctaaa
cgtcccacctatttccccattgagctctgcactttggtttcattgcaaagatacacaaaa
gccttgtccacctttcagagggcttccttggtggagaagtcgaggcaaaagccgcaggag
agaatggaaattttgagtgatgctctcaaaatcaacaattatgatgctgagcttctgctt
cgttcttgtgatgtctcaatcaatagcaacttcacacaggttgaagggcgtgtgctgcct
gcccccaagttgaaggcaggaaatggagttgatattttcgcgcaaaatggcaggtggaac
tttaataataagagattctttgatccagcaaaggtagagcaatgggctgttgtgaacttt
tctacacgctgtaatatcggcaacctagtcggacatttgagaagacttggagagatgaaa
ggaattagtgtgcaagcttcatttaaagtgtttgaagagtctctgcatcttagatgggct
ccagctgttgtcagagttgacagaatgtttgaagagatccagtcaaaatttcctgatgcc
aaatttcttctctgtcttcttcctgagaggaaaacttgtgatatatatggaccatggaag
gtgaaaaatatgactaatcgtgatggtatagtaacccaatgcttggcggctcctgaaaga
gttaatgatcagtatctcacaaaccttctccttaagatcaatgcaaagctcggtggttta
aattctatgttagctgttgaggattctcgttctatccccatggtatctaaggtccccacc
atgattcttggaatggacgtatcacatggctctcccggccagtctgatgtcccatcaatt
gctgcagttgtgagttcaaggcagtggccttcaatatctcattatagagcttctgtgcgc
actcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactaag
gacgatgggattatgagggaacttttgatagatttttattcgagttccaggcaaacgaag
cctcagcatattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttcta
agcatagacctggaccagatcattgaggcctgcaagcttctagatgaaacgtggtcgccc
aagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatct
cctaataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaat
gacttctatctgtgtgcccacgcgggaatgattggtacgactcgacctacacattaccat
gtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctg
tcctatgtgtaccaaagaagcactactgctacatccattgtggctccgataggttatgcc
catttggccgctgcacaggttggacaatggatgaaattcgaggacacatcagagacatca
tcaagccagggtggtctgagaaatgctagtccagttactgttcctcagttgccccgtctt
aaaaagaatgttgctagctccatgttcttttgttga
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