Solanum stenotomum: 125872204
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Entry
125872204 CDS
T08385
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125872204
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125872204
Meiosis-specific proteins
Cohesin complex and associated proteins
125872204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_23
ABC_tran
CENPH
FapA
Baculo_PEP_C
Laminin_II
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
125872204
NCBI-ProteinID:
XP_049408865
LinkDB
All DBs
Position
8:complement(718331..731832)
Genome browser
AA seq
1218 aa
AA seq
DB search
MPSQASPGKIHRLELENFKSYKGFQSIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGAQLKDLIYAFDDREKEQRGRRAFVRLVYQLANGTEIQFTRAITSAGASEYRIDGKA
VNWDEYNAKLKSLDILVKARNFLVFQGDVESIASKNPKELSALLEQISGSEEFKRRYDEL
EEEKARAEEKKALAYQKKKTVTMERKQKKEQKEEAEKHLRLQDQLKSLKQEYFLWQLFNI
EKDIAKTNEELDAEEVRVKEIVEKLGEYESESSRKKKELSGYMREIALRERKIADRKNKL
DKNQPDLVKLKEEISRITSKIKSTSKDLDKKRDEKRRHTDEVKKLQNDLKDITKQLDELR
QRSRDAGGKLQLADSQLETYHQIKEEAGMKTAKLRDEKEVLDRQQRADIDAQKNLEENLQ
QLENRKHELESQEKQMQTRLKKILDAVKKHDEELKRVKEEQREMKNKLRRSREKHDNLRK
RLDEVEDQLRELKAERHENERDARLSQAVETLKRLFPGVHGRMTDLCRPTHKKYNLAVTV
AMGRYMDAVVVEDDQTGKECIKYLKEQRLPPQTFIPLQSVRIKPVVERLRTLGGTAMLVF
DVIQFDQALEKAILFAVQNTIVCNDLKEAKYLSWDGERLKVVTLDGILLTKSGTMTGGTS
GGMEARSHKWDDKKIDGLKKKKEGLESELEELGSIREMQLKESEASGRISGLEKKIHYAE
IEKKSIADKLQNLEREKGSIENEIGHIQPELEQLNRKIDARAQEILSREKRINDIVDRIY
KKFSESVGVRNIREYEENQLKAVQEMSEERLNLHNQQSKLKSQLDYEQKRDMDSRIVKLE
STLNNLKEKLKEVETKEADLKSSMEKATKEIDDYKEEVLAWRSKSEECEKQLQEWQKKIS
AETTSISKHNRQIKSKEAQIEQLNSKKQEILEKCELEQIELPTISDPMDTGESTPGPVFD
FSKLNRMYQQITKPAEREKREVDFTQKIASLMSEIERTAPNLKALDQYKDLLKKEEDVNK
EFEVAKNEEKKVTDEYNRVKGARCELFMKAFNHISGKIDKIYKQLTKSNTHPLGGTAYLN
LDNEDEPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFAIHSFRPSPFFILDEVD
AALDNLNVAKVAGFIRSKSCGGARLTQDPEEGCGFQSIVISLKDSFYDKAEALVGVYRDA
ERGCSSTLTFDLTKYRES
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcacaggcgtcgccgggaaaaatccaccggctggaactcgagaatttcaagtcc
tacaaaggatttcaatcaattggcccattttacgactttacagcgattatagggccaaat
ggagcaggaaaatctaacctaatggatgcaatcagcttcgtccttggagttcgtacgggt
caacttcgaggtgcacagttgaaggacttaatttatgcttttgacgaccgtgaaaaggag
cagagaggtcgaagagcttttgtgaggctagtttatcagcttgctaatggtacggaaatt
cagtttacgcgtgctattacgagtgctggtgctagtgagtatcggattgatgggaaagct
gttaattgggatgagtataatgccaaattgaagtcccttgatattctggttaaagcgcgg
aattttcttgtctttcagggtgacgttgagtctattgcatctaaaaatccaaaagaactc
tctgcactccttgagcaaatatctggatctgaagagttcaagagacgctatgatgaattg
gaagaagaaaaagcaagagctgaagaaaagaaggcacttgcttaccagaaaaagaaaact
gtaactatggagcgaaaacagaaaaaggaacagaaagaagaagctgagaagcatcttcgt
ttacaagatcaactgaaatctttgaagcaagaatattttctttggcaattattcaacata
gaaaaggatattgctaagacaaacgaggaacttgatgccgaagaagtaagagtcaaagaa
attgtggagaaacttggggaatatgaaagtgaatctagcagaaagaagaaagaactaagc
ggatacatgagagagattgcattgcgcgagaggaagattgcagatagaaaaaacaaactt
gacaagaatcaacctgatcttgtaaagttaaaggaagaaatatcgcggattacttcaaaa
atcaaaagtacaagtaaagatcttgataagaagagagatgaaaaaagaagacatacagat
gaggtgaagaagcttcaaaatgacttgaaggacattacaaagcagctggatgagttgcgt
caaagaagtcgagatgcaggggggaaacttcaattagctgacagtcaattggagacgtat
caccaaattaaagaagaggctggcatgaaaactgcgaaactaagagatgagaaagaggtc
ttggataggcagcagcgtgctgatattgatgctcagaagaatctggaagaaaatcttcag
cagcttgaaaatcggaagcatgagcttgagtctcaggagaaacagatgcaaacaaggttg
aagaaaattcttgatgcagttaagaagcatgatgaagaactgaaacgggtgaaagaagaa
cagcgtgaaatgaaaaataaacttcgacgctccagagaaaaacatgacaatctgcgcaaa
cgacttgatgaagtagaggaccaactacgtgagttgaaggctgagagacatgaaaatgag
agagatgccagattgtctcaagcagttgaaacgctgaagcgtctgtttcccggtgttcat
ggtcgaatgacagatctctgcaggccaacacataagaagtataaccttgctgtaacagtt
gcaatgggcagatatatggatgcagttgtagttgaggatgaccaaacaggaaaagaatgc
atcaagtatttgaaagagcaaagacttcctcctcagacatttatacctcttcagtcggtc
cgtataaagccagtagttgagcggctgcgcacattgggtgggactgcaatgctggttttt
gatgtcatacaatttgatcaagcattggagaaggctatattatttgctgttcagaatacc
attgtttgcaatgacttaaaagaagctaagtatcttagctgggatggtgagagacttaaa
gttgtgactcttgatgggattttgttaacaaaatctggtacaatgactggtggtactagt
ggtggaatggaagcacgctctcacaaatgggatgacaaaaaaattgacgggcttaagaag
aaaaaagaaggtcttgagtcagagttggaggagcttggatcaataagggagatgcagctt
aaggagtctgaagcatctggcagaatcagtggacttgagaaaaagattcactatgctgag
attgaaaagaaaagtattgcagacaaacttcaaaatttggaacgcgaaaaggggagtatt
gaaaatgaaattggacatatccagcctgaacttgagcagttgaacagaaaaattgatgca
agggcacaagagatcttatcacgagagaaaaggatcaatgacattgttgacagaatctac
aaaaagttcagtgaatccgttggggtgagaaatattagggagtatgaagaaaatcagctc
aaagctgttcaggaaatgtctgaagaaaggctcaatttacataatcaacaatcgaagctt
aagtcacagttggactatgagcagaagcgggacatggattcacgaattgtaaaactggaa
tcaacccttaataacttaaaagagaaattaaaggaggttgagaccaaggaggcggatctg
aagtcgtccatggagaaagctacaaaggagatagacgattacaaggaagaagtattagca
tggaggtccaaatcagaagaatgtgaaaagcagctgcaggagtggcagaaaaagatttct
gctgaaacaactagcattagcaaacataaccgtcaaattaaatcaaaggaggcacagatt
gaacaactgaattcaaaaaagcaggaaatattggagaaatgcgaactggagcaaatagaa
ctgcccactatctctgatccaatggatactggagagtctacacctggccctgttttcgat
ttcagtaaactgaatagaatgtatcagcagattacgaaacccgctgaaagggagaaacgt
gaggtggattttactcagaaaattgcttccttgatgtcagagatagaaagaacagctcca
aatctgaaggcccttgatcaatacaaagatctactaaaaaaggaggaagatgttaataaa
gaatttgaagtggccaaaaatgaggagaagaaagttactgatgaatataatagagttaaa
ggggccaggtgtgaattgtttatgaaagctttcaatcacatatctggcaaaatcgacaag
atatacaagcaactcacaaagagcaatacacatcctctcggtgggacagcatatcttaac
ttggataatgaagatgagccgtttttacatggtatcaagtataccgctatgcccccaaca
aaacgatttcgggatatggaacagctttcaggaggagagaagacggttgcagcacttgca
ttgctttttgctatccacagttttagaccttctccattcttcatactggatgaagttgat
gctgcattggataatctgaatgttgccaaagttgctggatttattcgatcaaagtcctgt
ggaggtgctaggcttactcaggatcctgaagaaggatgtggcttccaaagcattgttatc
tctctcaaagacagcttttatgacaaagctgaagctttggttggtgtttacagggatgcc
gagagaggttgctcgagcacattgacatttgatctgaccaagtacagggaatcgtga
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