KEGG   Solanum stenotomum: 125872363
Entry
125872363         CDS       T08385                                 
Name
(RefSeq) autophagy-related protein 18a
  KO
K22991  WD repeat-containing protein 45
Organism
sstn  Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sstn04131]
    125872363
Membrane trafficking [BR:sstn04131]
 Autophagy
  Other autophagy associated proteins
   Others
    125872363
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 BCAS3_WD40 Beta-prop_IFT122_1st WD40 Beta-prop_EML_2 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd CFAP251_N Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_RSE1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st WD40_Gbeta DUF7099 Beta-prop_HPS5 Beta-prop_EML Beta-prop_IFT122_2nd Beta-prop_RIG_2nd Beta-prop_EMC1_N DUF6764 Ge1_WD40
Other DBs
NCBI-GeneID: 125872363
NCBI-ProteinID: XP_049409039
LinkDB
Position
1:complement(10991432..10996008)
AA seq 444 aa
MTSTLSASSAWPESPSVPPPMPENSPDSDDRSSLSDLSDISAAVTDAVDEDERRSQTSVT
SPTNTAATSVQNVNPSPNSISLPVDSSTPNVLYLSFNQDYGCFAAGTDRGFRIYNCDPLR
EIFRRDFTGNSNGGGGIGVVQMLFRCNILALVGGGPEPQYPLNKVMIWDDHQSRCIGELS
FRSEVKSVRLRRDRIVVVLAQKIFVYNFSDLKLLHQIETVANPKGLCEVSQVSGSMVLVC
PGLQKGQVRVEHYASKRTKFIMAHDSRIVCFALTNDGRLLATSSSKGTLVRIYNTLDGSL
VQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFNLKVDSAALGVDRPRGASESNAT
SPSAGSHLSFIRGVLPKYFSSEWSVAQFRLQEGLQHIVAFGHQKNTVVILGMDGSFYRCQ
YDAATGGEMTLLEHHSFLKSEENF
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgacctctaccctctctgcctcctccgcttggcccgaaagcccttccgttccccctcct
atgccggaaaattctcctgattccgatgatcgttcctctctctctgacctctccgatatc
tcagctgccgtaactgacgccgttgatgaagatgaacgtcgctctcaaacctcggttacc
tctcccactaatacagccgccactagcgtacagaacgtgaaccctagccctaattctatt
tctcttcccgttgattcctctactccgaatgtcctctacctatccttcaaccaggattac
ggatgcttcgcggcaggcaccgatcgagggttccggatctacaactgtgatccgctccgt
gagattttccgccgcgattttaccggcaattctaatggtggaggtggaattggtgttgtt
cagatgctttttcggtgcaatattttggcgttagttggtggaggtccggaacctcaatat
cccttgaataaggtgatgatatgggatgatcatcaatctaggtgcatcggcgagctatcg
tttcgatctgaggtgaaatctgtgaggctgagaagggatagaattgtggttgttttggcc
cagaagatatttgtttacaacttttcggatttgaaactgttacatcagattgagacagtg
gcgaaccccaagggtttgtgtgaggtgtcacaggtatcgggatcaatggttctggtttgt
ccgggtcttcagaagggtcaggtgagagtggaacattatgcttctaagaggaccaagttt
ataatggcacatgactcgaggattgtgtgttttgcgcttacaaatgatgggaggttgttg
gctacttctagcagtaaagggactcttgtcagaatatataatactttagatggatctttg
gtccaagaggtcagaagaggtgcagatagagcagaaatttatagccttgctttttctcca
actgcacaatggctagctgtttccagtgataaaggaactgtccatgtgttcaatctaaag
gttgattcagcagctttaggagttgatagaccaagaggggcatctgagtcaaatgctaca
tctccatcagctgggtctcatctctccttcataagaggtgtgctaccgaagtatttcagc
tctgagtggtctgtggcacagttccgcttgcaagaaggtctgcagcacattgtggccttc
ggtcaccaaaagaatacggttgtgattcttggcatggatggcagtttctaccgatgccag
tatgatgcagcaactggtggggagatgaccctgttggaacatcatagtttcttgaagtcc
gaggagaacttctaa

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