Solanum stenotomum: 125872386
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Entry
125872386 CDS
T08385
Name
(RefSeq) LOW QUALITY PROTEIN: probable RNA 3'-terminal phosphate cyclase-like protein
KO
K11108
RNA 3'-terminal phosphate cyclase-like protein
Organism
sstn
Solanum stenotomum
Pathway
sstn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125872386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125872386
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
90S particles
Other 90S particles
125872386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTC
RTC_insert
Motif
Other DBs
NCBI-GeneID:
125872386
NCBI-ProteinID:
XP_049409056
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Position
8:3450709..3454347
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AA seq
371 aa
AA seq
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MQGKVCYMKLKGSQNLRLRLLVATLSSKSIIIEDIRADSTWLGLRPLEVSFLRLLEKVCD
DCVVEINETGTKLKYKPGIIMGGRHLVHDCGLNRSIAYFLEPLILFGLFGKKPLTIRLKG
ITNDAKDPFIDTFXSTTXKQFGVPAEGLELKIESRGVAPKGGGEVVLSVPMVPNSLTATK
WVDKGLVKRIRGVSFSTRVSVQFENTMIHAAREILNPLLADVHIFTDHKAGAQAGMSPGY
GISLVAETTSGDTTVSYARGEDDADLEDDRKALIPAEEVGEQIASALLGEIKQGGVVDST
HQGLLFLLCALCQKDVSEVRVGKLSPYGIEALRHIRDFLGVKFVMKPDASTGTVNLMCLG
SGFQNLSRKVS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaaagtatgttacatgaagctgaagggaagtcaaaacttgagactccgtctt
ttagtagcgaccctttcatccaaatcgattattattgaggatatacgtgctgattctact
tggcttggtcttcgtccacttgaggtatcttttctccgtctgcttgaaaaagtttgtgat
gattgtgttgttgaaatcaatgaaactggcacaaagttgaagtacaaaccaggaattata
atgggaggaagacatttagttcatgattgtggtctcaatcgctcaattgcttacttttta
gaaccgttgattctgttcggtttgtttggaaagaaaccactcaccattaggcttaaaggg
atcacaaatgatgcaaaggacccatttattgatacattttgatcaactactnngaaacag
tttggagtccctgcagaaggattggaactgaaaattgagagtcgtggagttgcccccaaa
ggtggtggagaagtagttctttcagtccctatggtcccgaatagtttaacggctactaaa
tgggttgacaaaggtctggtgaagagaattagaggtgtttccttttcaactagggtctct
gttcagtttgagaataccatgatacacgcagctcgtgaaatcttgaatccgttgcttgca
gatgttcacatatttacagatcataaagctggagcacaagccggaatgtcacctggctat
ggaatttctctagtggcagagactacatctggtgataccacagtttcttatgcaagagga
gaagatgatgctgacctagaggatgataggaaagctctgatccctgctgaggaagttggt
gagcaaattgcttctgcactacttggggaaataaaacaggggggagtagttgattcaaca
catcagggactgttgtttctcctatgtgcgttgtgtcagaaagatgtttcagaagttcgt
gttgggaagttgtcaccatatggaatagaagcattaaggcacatcagagactttttgggt
gtcaagtttgtcatgaaacctgatgcctccacaggaactgtcaatctcatgtgtcttggc
tctggatttcagaatttatcccggaaagtatcatga
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