Solanum stenotomum: 125872556
Help
Entry
125872556 CDS
T08385
Name
(RefSeq) peroxisome biogenesis protein 6
KO
K13339
peroxin-6
Organism
sstn
Solanum stenotomum
Pathway
sstn04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125872556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125872556
Membrane trafficking [BR:
sstn04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
125872556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
RuvB_N
AAA_22
Rad17
AAA_33
AAA_5
nSTAND3
NPHP3_N
AAA_28
AAA_7
RNA_helicase
TsaE
DUF815
AAA_17
AAA_14
Parvo_NS1
TIP49
AAA_25
Vps4_C
AAA_2
ATPase
Mg_chelatase
IstB_IS21
PhoH
Motif
Other DBs
NCBI-GeneID:
125872556
NCBI-ProteinID:
XP_049409254
LinkDB
All DBs
Position
8:complement(59326930..59339477)
Genome browser
AA seq
929 aa
AA seq
DB search
MVEKRKPLILSSTKNLLNSLLNSETQTQISLLSTVQLRAGILQVSKDASKISNPKFVNFG
DSALVGLTTSQLRRLCVTSGSLVLIKNVNTSQQRIGQVVVLDPPSSDKVSSERSSLSHSS
LTTFLLPIHSYPDCHSIKPDGEVAYLSPILAFNLNLHLSCLRSMIHQGKEALSPIFEAKS
DNIVSEKDNTLITLGLEPLDQLPKYATHLRASFVKIPECGTVDSVKKDSSIEAEDRQELI
DMELNKYFGVDRFLSRGDLFSICINWNCKSALCIPCSQKKQNDGSDLIYFKVVGMEPSEE
PVLKVNRTRTALVLGGNVPSAVPPDFLIPRPQGSLPLQVSTVKTLASILIPPLCPSALSS
KFRVVVLLHGLTGCGKRTVVKFVARQLGLHVVEYNCQSIVANSDRKTSAALAEAFSMARR
YSPTILLLRHFEAFRNLASNEGSPHDQVGMNLEVASVIKEFTEPIAEDEEIYSEGKSNAH
DQVKVAQPINRHPVLLVAAADSPEGLPPTIRRCFSHEISMDPLNEEQRKEMLSQSLQHVS
ELLPNTSLEDLVKDLVGQTSGFMPRDLRALVADVGANLVHSHASQDVKVVHGDLKEGSHE
SNPIENDGSHDSANSLSKEDVMKSLERSKKRNATALGTPKVPNVKWEDVGGLEDVKKSIL
DTVQLPLLHKDLFSSGLRKRSGVLFYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMY
IGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLN
DSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSEASYRERVLKALTRKFKLKEDI
SLLSIAKRCPPNFTGADMYALCADAWFHAAKRKALASDSDSTGSDEMDVSIIVEYEDFLK
VLGEISPSLSMAELKKYELLREQFEGSSR
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaaaaaggaagcctttaattctttcttccaccaaaaatctgctaaattcactc
ctgaattcagaaacccaaacccagatttcattattgtcaacagtacaattgagagctgga
attcttcaagtatcaaaagatgcaagcaagatttcaaaccccaaatttgttaattttggt
gattctgctttggtggggttaactacttctcagcttagaagactctgtgtaacttctggt
tcactggtactcatcaagaatgtcaatacaagtcaacaaagaattggacaagtggtagtt
ctagatcctcccagttcggacaaagtttcatctgagcgtagctcattgtcacattcttcc
ttgacaacatttctcttgccaatacatagctatcctgattgtcacagtattaaaccagat
ggagaagttgcttatttatctccaattctggcatttaaccttaatttacatttatcatgc
ttgagatcaatgattcaccaaggcaaagaagctttgtcaccaatatttgaggccaaatca
gataacatagtgagtgaaaaagataatactctcattactctaggacttgaacctttagat
cagttgccaaaatatgccacacacctgagggcttcttttgtgaagataccagagtgtggc
actgttgactcagtcaaaaaagattcatctatagaagctgaagatcgtcaagagttgatc
gatatggaattgaataagtactttggagtagatagatttctttctagaggtgatcttttc
agcatatgcatcaattggaactgcaaatcggctctctgcattccttgcagtcagaagaag
caaaatgatggttcagaccttatatatttcaaggttgtaggtatggaaccttctgaagaa
cctgttctaaaagtcaaccgtactcgaaccgcccttgtacttggagggaatgtaccttct
gctgttcctccagatttcttgattcctcggccacaaggttccctgcctttacaagtgagc
acggtgaagactttagcctccatacttataccaccattatgtccatcagccctttcatca
aaatttcgggttgttgtgttgttgcatggcttgactggatgtgggaagagaactgtggtt
aaatttgttgctcgtcaattaggcctccatgtagtggaatacaattgtcagagcatagtt
gcaaattctgatagaaaaacatctgctgcccttgctgaagccttcagcatggctcgcagg
tactctcctactattctacttcttcgccattttgaggccttccgtaacttggcctctaat
gagggttcaccacatgaccaagttggtatgaatttagaagttgcatccgtcataaaggaa
tttactgagccaattgctgaagatgaagaaatttactcagaaggaaagtcaaatgctcat
gatcaagtaaaggttgctcaacccataaatcggcacccggtgctgttagttgctgctgct
gatagtcctgaaggccttccaccaactattaggcgttgtttcagtcatgagattagcatg
gatccgttgaatgaagagcaaaggaaggaaatgctctcccagtctcttcaacatgttagt
gaactacttccaaatacttctttggaggaccttgtgaaagatttggttggtcagacatca
ggattcatgccaagggatctgcgagctttagttgctgatgttggtgcaaatctagtccat
agtcacgctagtcaggatgtgaaggttgtgcatggagatctgaaagagggttctcatgag
agcaatccaattgagaatgatggctcacatgactcggcaaattcactaagcaaagaagat
gtaatgaaatcactggaacgatcaaagaaaagaaacgcaacagcattgggtactccaaag
gttccaaatgtcaaatgggaagatgttggtggacttgaggatgtgaagaaatcaattttg
gacactgtacagctgcctcttttacataaggacttgttttcgtctggattgcgcaagcga
tctggggttcttttctatggacctcctggtactggaaaaactttactggcaaaagctgtt
gctactgaatgctccctgaattttctcagtgtgaaagggcccgagttgattaacatgtac
ataggagaatcagagaaaaatgttcgggacatctttcagaaggccagatcagctcgacca
tgtgtcatcttcttcgatgaacttgactcgcttgctcctgccaggggtgcttctggagac
tccgggggcgtaatggatcgagtggtttctcagatgcttgctgagattgatggcctgaat
gactctacccaggacttgtttattattggagctagcaacaggccagatcttattgatcct
gcccttttgaggccagggcgattcgataagctcctttatgttggtgttaattctgaagcc
tcgtacagggagagggtccttaaagcacttacgcggaagtttaaattgaaagaagatata
tctttactctcaatagcaaaaaggtgtcctcccaacttcacgggagccgacatgtatgca
ctgtgtgctgatgcttggtttcatgctgcgaaacgcaaggcattagcttcagattcggat
tcaactggctcagatgaaatggatgtctcaattatcgtggaatacgaggattttttaaag
gtcttgggagagatctctccctcgttgtcaatggcggagcttaaaaagtatgagttgctc
cgggaacagtttgaaggatcatcaagatga
DBGET
integrated database retrieval system
