Solanum stenotomum: 125872577
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Entry
125872577 CDS
T08385
Name
(RefSeq) alpha-soluble NSF attachment protein
KO
K15296
alpha-soluble NSF attachment protein
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125872577
Membrane trafficking [BR:
sstn04131
]
SNARE
SNARE associated proteins
Others
125872577
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP
TPR_12
TPR_2
TPR_14
HEAT_Nup120
TPR-S
TPR_7
TPR_8
ARM_TT21
DHR-2_Lobe_A
Spatacsin_C
TPR_1
Sel1
TPR_MalT
TPR_16
MG280
ParM_N
T6SS_VasJ
Foie-gras_1
MIT
ArdA
Motif
Other DBs
NCBI-GeneID:
125872577
NCBI-ProteinID:
XP_049409284
LinkDB
All DBs
Position
8:27691505..27699431
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AA seq
289 aa
AA seq
DB search
MGDHIARGEDFENKAEKKLGGWALFGSKYEDAADLFDKAGNCFKLAKSWDKAGAVYVKLA
NCHLKLDSKHEAANAYADAAHCYKKSNIKEAVSCLEQAVNFFLDIGRLNMSARYYKEIAE
LYEQEQNLDQAINYYEKAADLFQSEDVTTTANQCKQKVAQFSAQIEKYPRAIEIFEEIAR
HSVNNNLLKYGVRGHLLNAGICQLCKGDVVAINNALERYQELDPTFSGTRECKLLVDLAA
AIDEEDVAKFTDAVKEYDSMTQLDAWRTTLLLRVKETLKAKELEEDDLT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcacatagcaagaggtgaagatttcgagaacaaggctgagaagaaactcggc
ggatgggcccttttcggttccaaatacgaagacgcagctgatctgttcgataaagctggc
aattgctttaaactcgccaaatcatgggataaagctggagcagtatatgttaaattggct
aattgtcatcttaaattggatagcaaacatgaggctgcaaatgcttatgcagatgctgct
cattgctacaagaagtcaaatattaaagaggcagtatcatgtttagagcaggcagtgaac
ttttttctggacattgggaggctaaatatgtctgcaagatattacaaggaaattgctgaa
ttatatgagcaagagcaaaatttggatcaggctattaattactatgagaaggcagctgat
cttttccagagtgaagatgtaacaacaactgcaaatcaatgcaaacagaaagttgcacaa
ttctctgctcaaatcgagaaatatccgagagcgatcgagatctttgaggagattgcacgt
cactcagtcaataacaacttgttgaagtatggagttagagggcatcttcttaacgctggt
atttgccaactttgtaaaggtgatgttgttgcaatcaacaatgcgttggagcgatatcag
gagctggatccaacattttcagggacacgcgaatgcaaactgctagtggatttggcagct
gcaattgatgaggaagatgttgcaaagttcactgatgctgtcaaagagtacgatagcatg
acacaactggatgcttggaggacaacacttcttctaagagtcaaggaaacattgaaggcg
aaggagcttgaggaagatgatcttacttaa
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