Solanum stenotomum: 125872699
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Entry
125872699 CDS
T08385
Name
(RefSeq) BRCT domain-containing protein At4g02110-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
sstn
Solanum stenotomum
Pathway
sstn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125872699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sstn03032
]
125872699
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125872699
DNA replication proteins [BR:
sstn03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
125872699
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
125872699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
125872699
NCBI-ProteinID:
XP_049409416
LinkDB
All DBs
Position
8:complement(59074687..59084554)
Genome browser
AA seq
1179 aa
AA seq
DB search
MTQDMLYEDSSKIFVGVRFVLIGFVSLRKEQIRSKLVEGGGVDAGKYGPDCTHLIIDSVI
YDDPICVSARRVGKIVVTSLWVAHSFDLGMPVDHHSVMYRPPRNLNGIPGAKSLIVCLTG
YQRQDRDDIMTMVGLMGANFSKPLVANKVTHLVCYKFEGEKYELAKKMKTIKLVNHQWLE
DCLKSWEILSEAEYDKSGYEMEMMEAEAKDSEDENEGITANRSAETIAIMGPENPKSPNQ
FLVKQEASTNISELKNTFRGLPGLGNTKELSLSASKQSKSDQVPAFEESPNRHDEMLNSN
FCRTKEEPPSSMQQNGSDLVSVSNSARKSPHSCSSREFPRKFSSPMTSELMKSYAGSPAA
TEAGIGFDCFNLSSQRGLEKSELGVKTPKNLSFSGKGQSSRLPEKRNMGISDSSFKSPRT
GNNPESIPDGYLTANRSEELINSSKLNSLSHGGSHLLSRNPTPHLDKGVTLETMQHHDST
ISNPATLSTGQGHDEDAPQSSTCMIMGLKGTSHATVDVSGPLDERHDVPSPVNERRDTPK
SNVLAEFNKAGDDSMLESKTLKKRSLSKKTLGSRQSLGKGDGRNQKGSLLINKTVLTNDS
AASSSGGREETEHQNILSSTKGEVLPADNADSSKEIERNNFLNSEKESAKTNESLNDDTE
APEDQEDEELNVLREKSTETEAQHSGLQSVEKKINANKVVNKNDRKHIAKSLSTESNEFE
TQRTSSGKETKLSKSTSVGKASEEKVPEGPKCLKKNSKKTNLATKRAAASVEGAERKKCR
TDGIKVEAKKGKRSPSETGKATVISTENQLKNSMDVEKENVPVIGLQNASYNEHEADRSS
PYDKKSRSLQVTKVQSEPRWFIVSGHRLQRKEFQQVIKRLKGKVCRDSHQWSYPATHFIV
PAPVRRTEKFFAAASSGRWILKTDYLTACVEAGKLLDEEPYEWHKKGLTEDLAINLEAPR
KWRLLRERTGHGALYGMRIIIYGDCIVPPLDTLKRAVKAGDGIILATSPPYSRFLESGVD
FAIVSEVMPRCDRWVQEFLRYEIPCVLPDYLVTYVCKPGYTLNNYVQYNTHSWAERSLKK
HVNRLEEIVEEMEPSDDSSNDIACQVCGSPDRGEVMLICGDESGSLGCGIGMHVDCCDPL
LECVPEEDWFCPECSKNISNTSTKRKSKKGTSTSKKKKK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagatatgttgtacgaagacagctccaagattttcgttggtgttcgttttgtg
ctaattggattcgtctcccttaggaaggaacagattcggtccaagctcgtggagggtggt
ggagttgatgcaggcaaatatggaccagattgcacccatcttattattgatagtgttatc
tatgatgaccccatatgtgtttctgctcgacgagttggaaaaatagttgttaccagcttg
tgggttgcacacagttttgatttgggaatgcctgtcgatcaccattctgtcatgtacaga
cctccaagaaatttgaatggaattccaggtgctaaatcactgatagtctgcttaactggg
tatcaacggcaagatcgagatgatattatgacaatggtgggactgatgggtgcaaacttt
tcaaagccgttggtagcaaacaaagtcactcatctcgtatgctacaaatttgagggggag
aaatatgaacttgccaagaaaatgaagacgattaagcttgttaatcaccagtggttggag
gattgtttgaagtcttgggaaatcctttcagaagcagagtatgataaaagtgggtatgag
atggagatgatggaagctgaagccaaagattctgaagatgaaaatgagggcattactgct
aacaggtctgcagagacaatagctatcatgggtcctgaaaatccaaaaagtcctaatcaa
ttccttgtgaagcaggaagcctctacaaacatttcagaattaaaaaacacatttagaggc
ttgcctggtcttgggaacacaaaagagctgtcattatctgcttcaaagcagtcaaaatct
gaccaggttccagcctttgaagaatctcccaataggcatgatgaaatgcttaattccaac
ttctgtagaacaaaagaagagccaccatctagcatgcaacaaaatggaagtgatttggtt
tctgtttcaaatagtgccaggaagtctccccattcttgttcgtccagagaattcccaagg
aaattcagttctccaatgacctctgaacttatgaagagttatgcaggaagtcctgccgct
actgaagcaggtatagggtttgattgctttaacctgtcctctcagagaggactagaaaaa
agtgagttaggtgtaaaaactccaaagaatttgtcgttttctgggaagggtcaaagcagt
agactgcctgagaaaaggaatatgggcatttcagacagtagcttcaagtcaccaaggact
ggtaataatccagaaagcataccagatggttatttgacggcaaatcggtctgaagagtta
ataaactcgtcaaagttaaatagtctaagccatggaggcagtcatctattgtctaggaac
cctacccctcacttggacaagggtgtaactttggaaaccatgcagcatcatgattcaacc
atttccaatcctgcgacactaagcactgggcaagggcatgatgaggatgcacctcaaagc
agcacttgtatgattatggggttgaaagggactagtcatgctactgttgatgttagtggg
ccactggatgaacggcatgatgtcccatctccagttaatgaaagaagagataccccgaag
tctaatgtgctggctgagttcaataaagctggagatgattccatgttagagtctaagaca
ttgaagaaaagatcactttccaagaagacactcggatctagacaaagtctcggtaaaggg
gatggcagaaatcagaaaggttctttactcattaacaagactgttctgacgaatgattca
gctgcttccagtagcggaggtagagaggagacggagcaccaaaatatcttaagctctaca
aagggtgaggttctgcctgcagataatgctgactcgagcaaggagatcgagagaaataat
tttttgaattctgaaaaagaatcagccaaaacaaatgaatccctaaatgatgatactgag
gctccagaggaccaagaagatgaagaattaaatgttctaagagagaagtctactgaaact
gaagcacaacattcaggacttcaatcagtggagaagaaaataaatgcaaacaaggtggta
aataagaatgacaggaagcatattgcaaagagtcttagtactgaaagcaatgaatttgaa
actcaaaggacttcttctggcaaggagaccaagttaagtaagtcaacttctgtggggaaa
gcttcagaggagaaagtacctgaaggtccaaaatgtctgaagaagaacagcaagaaaact
aatctagctactaaaagagctgctgcttctgttgaaggcgcagaaaggaagaagtgcaga
actgatggaatcaaggtagaagcaaagaaaggaaaacggtctccatctgaaactggaaaa
gccacagtaatttcgactgagaatcaattgaagaactccatggatgtggagaaggagaat
gtgcctgttattggactccagaatgcaagttataacgaacatgaagctgacagaagttct
ccttatgataaaaagtctcgctcgttgcaggttacaaaagtacaaagtgagcctaggtgg
tttatagttagtggacatcggctacaaaggaaggagtttcagcaggttatcaagcgattg
aaaggaaaagtgtgcagagattctcaccagtggtcatatccggcaacccatttcattgtt
cctgctccagtacgacgaacagagaagttttttgctgctgcatcctctggaaggtggatc
ttgaagacagattatttaactgcttgtgttgaggctggaaaattgttggatgaggagccg
tatgaatggcacaaaaagggattgactgaagacttagcaatcaacttagaggccccaaga
aagtggcgacttctgagggagaggacaggacatggcgcattatatggaatgaggataatc
atttatggagactgcattgtaccaccattggatacattgaagcgtgcagtcaaggcaggg
gatggcattatattagcaacttctcctccttatagtcgattccttgagtcaggtgttgac
tttgccattgttagtgaggtcatgccacgctgtgacaggtgggttcaagaattcttaagg
tatgagataccttgtgtgttacctgattacttggtgacttatgtgtgcaaacctggttat
accctcaacaattatgtgcaatacaacactcattcctgggcagaaagatcactgaaaaaa
catgtcaatcgtttggaagagattgttgaggagatggagccatcagatgacagtagtaat
gatatagcatgccaggtgtgtgggtcgcctgacaggggggaagtaatgctgatctgtggt
gacgaaagtggctctcttggatgtggcattggcatgcatgtagattgctgtgatcctctc
cttgaatgtgtacccgaggaagactggttttgcccagagtgtagcaagaacataagtaat
acaagtaccaaaaggaagtccaaaaaagggacctctacttcaaagaagaagaagaagtga
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