Solanum stenotomum: 125872706
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Entry
125872706 CDS
T08385
Name
(RefSeq) protein CASP
KO
K09313
homeobox protein cut-like
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125872706
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
125872706
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CASP_C
ATP-synt_B
HAUS6_N
Swi5
Motif
Other DBs
NCBI-GeneID:
125872706
NCBI-ProteinID:
XP_049409429
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Position
8:complement(8108846..8122170)
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AA seq
684 aa
AA seq
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MDSPRGGPERDKANSTSSSTPLAAVASFWKDFDLEKERSTLDEQGLRIAENQENSQKNRR
KLAESTRDFKKASTEDKLSLFNSLLKGYQEEVDNLTKRAKYGENAFLNIYQKLYEAPDPY
PVIASIAEKDSKLSELESENRKMKVELEEFRMEATHLKNQQATIRRLEERCRQLEQQMEE
KVKEIVEIKQRSLAEENQKTLEVLKEREQLLQDQLRQAQESVSTMQKLHELAQSQLFEVR
AQSEEERAAKQSEFNLLMDEVERAQGRLLSLEREKGLLRSQLQTANEDNDHKNSDNLDAD
SALENSLYAKEKIISELNVELHKLENTLSNEREEHINEIKKLNSLLNEKEVALEELKKEL
QTRPTTKLIDDLRKKVKILQAVGYNSIEAEDWEVATSGQEMSKLESLLLDKNRKVEHELT
QLKVQLSERTSLLESAEAKVVELTAKVNDQQRLIQKLEDDILKGYSSKDRKGTRFDDWDL
SESGATEPSENEEQRHVSSDQDQSSMLKVICNQRDRFRTRLRETEEEIRQLKEKIGSLTS
ELDKTKADNVKLYGKIRYVQDYNSERVISRGSKKYVEDLEGGFSSDVESKYKKMYEDDIN
PFAAFSKKERDQRYKELGLRDKITLSSGRFLLGNKYARTFVFFYTIGLHILVFTCLYRMS
ALSYLSHGEESLVGDKNLNLPHAL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggattccccgcgaggaggaccggagagagacaaggcgaactcaacttcttcgtctact
cccctcgctgccgtcgccagcttctggaaagactttgatttggagaaagaaaggagtaca
ctagatgagcaaggtcttaggattgctgagaatcaggagaacagtcagaagaaccgacga
aaacttgcagagagcacgcgagattttaaaaaagcttcaactgaagacaagttgagcttg
ttcaactctttgctcaaggggtaccaagaagaggttgacaatcttaccaagagagctaag
tatggggaaaatgctttccttaacatttatcaaaaactatatgaggcaccagatccttat
ccagtcattgcttcaattgctgaaaaggattcaaaactatcagaattagagtctgagaac
cgaaaaatgaaggttgaacttgaagaatttcgcatggaagcaactcatctgaaaaatcaa
caagcgacaataagaagacttgaagagcggtgccgccagttagagcaacagatggaggaa
aaagtcaaggaaattgtagaaatcaagcaacgcagtttggcagaagagaaccagaaaaca
cttgaggttttaaaagaaagggagcaattactgcaggatcaattacgacaagctcaagaa
agtgtttctaccatgcaaaagttgcatgaacttgcacaaagccagttgtttgaagttcgt
gcgcaatcagaggaagagagagccgcaaagcaatcggaattcaatctcctaatggatgaa
gttgaacgggctcaaggtcgccttcttagtcttgaaagagaaaagggattgttgcgctca
caattacagactgcaaacgaagataatgatcacaagaacagtgataatctggatgcagat
agtgctcttgagaattctctgtatgccaaagagaagataatctctgaactaaatgtggaa
cttcataagttggagaacaccttatcaaatgagcgagaagaacacatcaatgagataaag
aagttgaattctcttcttaatgaaaaggaggttgctcttgaagaactaaagaaggagctg
caaacacggcctacaacgaagctgatagatgatttgaggaagaaagtaaagatcttacag
gctgtgggttacaattcaattgaagctgaagattgggaagttgctaccagtgggcaagag
atgagcaaacttgagtcattacttcttgacaagaatcgaaaagtggagcatgagctaaca
caattaaaggtccaactttctgagaggacttctttgctggaatcagcagaagcaaaggtt
gtagagctgactgccaaggttaatgaccaacaaagattaatacagaagctagaagatgat
attcttaagggatatagttctaaagatagaaaaggtactcgatttgatgattgggatcta
tcagagtctggtgcaacagagccttcagagaatgaagagcagaggcatgtttcctcagac
caagatcaaagctcaatgcttaaggtgatctgcaaccaaagagaccgtttccgtacccgt
ttgcgggagactgaagaggaaattagacagctgaaggagaagataggatcactgacctca
gaacttgataaaacaaaagcagataatgtcaaactttatgggaagatccgttatgttcag
gattataattctgaaagagtgatttcaagaggatcaaaaaagtatgtagaggatttagaa
ggtggtttcagctctgatgtggaatccaaatacaagaagatgtatgaggatgacataaat
ccatttgcggcattctcgaagaaggaaagagatcaaagatacaaggaattaggtttgaga
gacaagattactctcagtagtggccgttttcttcttggtaacaaatatgctcggacattt
gtattcttctacaccattggattgcacattttagtattcacctgcctatacaggatgtca
gcgttgagctacctcagccatggcgaagaatctcttgtcggtgataagaatctcaatctt
cctcatgcactatag
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