Solanum stenotomum: 125872750
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Entry
125872750 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125872750
04121 Ubiquitin system [BR:
sstn04121
]
125872750
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125872750
Membrane trafficking [BR:
sstn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125872750
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125872750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
HypA
Rad50_zn_hook
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
125872750
NCBI-ProteinID:
XP_049409486
LinkDB
All DBs
Position
8:complement(53351328..53352689)
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AA seq
381 aa
AA seq
DB search
MSSYWCYRCTRFVRISVGNDVVCPHCDSGFIEVAEGNIGSPESRRRFPMWNERPESDRSV
NMGSRRSRRNRGDRSPFNPVIVLRSPSEAPGEDEAATAAEERSYELYYDDGEGSGLRPLP
PTMSEFLMGSGFDRLLDQLAQIEVNGFGRPENPPASKSAIESMPIIQIACNHVNSETHCA
VCKEAFDLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPAESTETTNSDNIARPR
NEEEAMGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFNNGVPRRIAWRSRRS
NTGRNGSGISRIFNNLTSFFRRLTPSSQRRSLSIHSSSSESSGSAVLRSRSVSSSSSIFS
RYLRRSRRNWVPEEHNGVTRW
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtactggtgttaccggtgtacaaggtttgttagaatttcagttgggaacgat
gttgtttgtcctcactgtgatagtggatttatagaagttgctgagggaaatattgggtcg
ccggaatctcgccggaggtttcctatgtggaacgaacggccagagtcagatcggagtgtg
aacatgggttctcgacggagcaggcgtaatcggggtgatagatctccgtttaatccggtt
attgttcttcgtagtccatctgaagctcctggggaggatgaagctgctacagctgcagag
gagcggagttacgagctttattatgatgatggtgaaggttcaggtctcaggccgttgccg
ccgacgatgtcggagtttttgatgggatctgggtttgatcggttacttgatcagttagca
cagatcgaggtgaacggttttggtcggccggaaaatccaccggcgtcgaaatcagcgatt
gaatcgatgccgattattcaaatagcttgtaatcacgtaaattccgagacccattgcgct
gtttgtaaagaagctttcgatttaggatctgaagctcgagaaatgccctgtaaacacatc
taccattccgattgtattcttccatggctatctcttcgaaattcgtgccccgtttgccga
cacgaattaccggcggaatcaactgaaactacaaactcggacaacattgctagacctaga
aacgaagaagaagcaatgggattgacaatatggagacttccaggaggtgggttcgccgtg
ggaagattttccggtggaagaagaggagctgagagggaacttccggtagtgtatacagaa
atggacggtggatttaacaatggggtacctagaagaatagcttggagatcaagaaggagc
aatacaggtcgaaatggcagtggaataagccgaattttcaacaacttgacatcatttttc
cggcgattaacaccatcttctcaacggcgatctctatccatacattccagtagttcggaa
tcatcgggatctgctgttttgaggagtcggagtgtgtcttcaagcagctcaatattcagt
aggtatttgagaagaagcagaagaaattgggtacctgaagagcataatggagtaaccaga
tggtaa
DBGET
integrated database retrieval system
