Solanum stenotomum: 125872793
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Entry
125872793 CDS
T08385
Name
(RefSeq) RING-H2 finger protein ATL74-like isoform X1
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125872793
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125872793
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
125872793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-RING_4
Prok-RING_1
zf-C3HC4_3
zf_RING_Vps8_fungal
FANCL_C
Motif
Other DBs
NCBI-GeneID:
125872793
NCBI-ProteinID:
XP_049409541
LinkDB
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Position
8:complement(25912605..25914604)
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AA seq
209 aa
AA seq
DB search
MEVYHRPYRLLLDPHPVIPPSSTISKPHHGYSNEANFDTNMVIILAALLCALICALGLNS
IVRCALRCSRRFAFESETARLAATGLKKSTLRQLPLSVYGSGVNIPATDCPICLGEFVDG
EKVRVLPKCHHGFHVKCIDIWLALHSSCPTCRQSLLEQNTTAAAAGDVETGLRQPPPPPP
AAPAIAAEELRCQMSMVRWRSCYYGQLVM
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttatcatcgtccttataggctacttcttgatccacatcctgtaattccacct
agtagtacaataagcaaacctcaccatggttactcaaacgaagcgaatttcgatacaaac
atggtgatcattttagctgctctgctttgtgcattaatatgtgctcttggattgaattca
attgtgagatgtgcgttacgttgcagcaggagatttgctttcgagtcagaaacagcacga
ttagctgcaacagggctgaaaaagagcacactgaggcaacttcccctctctgtttatgga
tcaggagttaatattccggctactgattgtcccatttgcctgggagaattcgttgatggt
gaaaaagtgagagttttgccgaaatgtcatcatggatttcatgtgaagtgtatagatatt
tggttggctttacattcttcatgtccaacatgccgacaatcgttgctggaacagaacaca
acggccgcagcagcaggggatgttgaaactggattgaggcaacctcctcctcctcctcct
gctgctcctgctattgctgctgaggagttgcgttgtcagatgtcaatggtaagatggagg
tcttgttactatggccagctagtcatgtag
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