Solanum stenotomum: 125872820 Help Entry 125872820         CDS       T08385                                  Name (RefSeq) vacuolar sorting protein 18-like   KO K20181   vacuolar protein sorting-associated protein 18 Organism sstn  Solanum stenotomum Pathway sstn04148   Efferocytosis Brite KEGG Orthology (KO) [BR:sstn00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     125872820  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sstn04131]     125872820 Membrane trafficking [BR:sstn04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     125872820    Hops complex     125872820 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 Clathrin zf-RING_Vps41 zf-RING_11 zf_RING_Vps8 RPN1_RPN2_N zf-RING_UBOX Nup54_57_C zf-rbx1 zf-C3HC4 zf_RING_Vps8_fungal Beta-prop_RSE1_1st zf-RING_2 Motif Other DBs NCBI-GeneID:  125872820 NCBI-ProteinID:  XP_049409576 LinkDB All DBs Position 8:complement(48960122..49014520) Genome browser AA seq 987 aa AA seqDB search MERRHHVFSVDLLERYATKGRGAITCMATGNDVIVLGTNKGWVIRHDFGVGDSYDIDLSV GRPGEQSIHKVFVDPGGSHCIATVIGSSGAETYYTHAKWTKPRILSKLKGLVVNAVAWNR QHITEASTREIILGTDNGQLYEMAVDVKDKMEKYIKLLFELKELPEAFTGLQMETASVHN GTRFYVMAVTPTRLYSFTGIGSLDAIFASYVDRTVHFMELPGEIPNSELHFFIQQRRAVH FAWLSGAGIYHGDLKFGAQHSSPNGDENFVENKALLDYSKFSEGVEGVKPSSLAISEFHF LLLIGNKVKVVNRISEQIVEELYFDQTSDAVSRGIIGLCSDASAGLFYAYDQNSIFQVSV NDEGRDMWKVYLDLKEYAAALASCRDALQRDQVYLVQAEAAFVAKEFLRAASFYAKINYV LSFEEISLKFISIGEQDALRTFLLRKLDNLSKDEKCQITMISTWATELYLDKINRLLLED DGALDSNNTEYQSLIKEFCAFLSDCKDVLDEATTMKLLESYGRVDELVFFASLKEQYEVV LHHYIQQGEAKKALQVLQKPNVATELQYKFAPDLIMLDAYETVESWMTTKSLNPRKLIPA MMRYSSEPHAKNETHEVIKYLEYCVHRLQNEDPGVHNLLLSLYAKKEDESALLRFLECKF GKGQPGGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEAD KVEDDEDLRKKLWLMIAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL IDDFKEAICSSLEDYNEQIEKLKQEMNDATRGADNIRNDISALAQRYTVIDRDEECGVCR RKILNVGGDYRMTTGYMAVGPMAPFYVFPCGHAFHAQCLIAHVTRCTNQAQAEYILDLQK QLTLLGAEPKNVSNGGLSEEPLASVTPMHKIRSQLDDAVASDCPFCGDLMIREISLPFIL PEEAEESESWEIKPHNHPSQRSLSLAV NT seq 2964 nt NT seq  +upstreamnt  +downstreamnt atggaaagaagacatcacgttttctctgtagatcttcttgaaagatatgccacaaaaggc cgtggagccattacatgcatggcgactggcaatgatgtcattgttcttggaaccaacaaa ggctgggtgatcagacacgactttggagtgggtgattcttatgatatagatctctctgtt ggcaggcctggggaacaatcaattcataaggtttttgttgaccctggagggagccactgt attgccactgttattggcagcagtggtgctgagacatattatactcatgctaaatggaca aagccacgtattttgagcaaactaaaaggtcttgttgtcaatgctgtcgcctggaacaga caacatataacagaagcttcaactagagaaatcattttgggtacggacaatggtcaactt tatgagatggctgtagatgtaaaggataaaatggagaagtacattaagttactatttgaa cttaaagaactacctgaggcattcactggtttgcagatggaaacagcaagtgtgcacaat ggtaccagattttatgtgatggctgttacacctactcgactttattctttcacagggatt ggatcacttgatgctatttttgcaagctatgtggaccgcacagttcatttcatggagctt cctggtgaaatacctaacagtgaactgcacttctttatccagcaaaggagggctgtacac ttcgcatggctttctggagcaggaatctaccatggtgacctaaaatttggagcacaacat agttcgccaaatggggatgaaaactttgtggaaaacaaagctcttctggactactctaaa ttctctgaaggagttgaaggtgtcaaacctagctctctggctatatccgagtttcatttc ctacttctcattggtaacaaggttaaggtggtgaacaggataagtgaacagatagtagaa gaactttattttgatcagacatctgatgcagtttcaagaggtattattggcttatgtagt gatgcctcagctgggttgttttatgcatacgaccaaaattctatcttccaggtgtccgta aatgatgaaggtcgtgatatgtggaaagtgtacttggacttaaaagaatatgctgcagct ttggctagttgtcgtgatgccctgcagagagaccaagtttatctggttcaggctgaagct gcttttgttgccaaggagttcctcagagctgcatcattctatgcaaaaattaactatgta ttgtcttttgaagaaatctcattgaagttcatcagcataggcgaacaggatgcactgaga acatttctcctgcggaagcttgataatctttcaaaggatgaaaaatgtcaaataacaatg atttcgacatgggctactgaattatatcttgataagatcaaccggctgcttctggaagat gacggtgcattggacagtaataataccgagtaccaatcactcattaaagagttttgtgct ttcctaagtgactgcaaggatgtattggatgaggcaaccaccatgaaactactagaaagc tacggtagagttgatgagctagtgttctttgctagtctaaaggagcaatacgaagttgtg cttcaccactatattcagcaaggagaagcaaagaaggcgttacaagttcttcagaagcct aatgttgcaacagaacttcagtacaagtttgcaccagatctcatcatgcttgatgcatat gaaactgttgagtcatggatgaccactaagagtttgaacccgagaaagctcattcctgca atgatgcgttattcaagtgaaccacatgcaaagaatgaaactcatgaagtaatcaagtac ctggagtattgtgttcatcgtctacagaatgaggatcctggagttcacaatctgttactt tccttatatgccaaaaaggaagatgagagtgctcttctgcgtttcctagaatgcaagttt ggtaaagggcaaccaggtggacctgaattcttttatgatcccaaatatgcgctacgcctt tgcctcaaggaaaagagaatgcgagcttgtgttcatatatacagcatgatgtctatgcat gaagaagcagttgccctagcattacaggttgatccagagcttgctatggctgaagcagac aaggtagaagatgatgaggacttgagaaagaagctttggcttatgattgctaagcatgtc attgagcaggaaaaaggaaccaaaagggagaatatacggaaggcaattgcttttctcaag gaaactgatggtctgttaaagattgaggacattttgcccttcttcccagactttgcttta attgatgacttcaaggaagcaatttgttcatccttagaagattacaatgagcaaattgaa aaactaaagcaggagatgaatgatgcaacccgtggtgcagataacataagaaatgacatc agcgctcttgctcagcgatatactgtaattgatcgggatgaggaatgtggggtttgccgg cggaaaatattaaatgtgggtggtgactatcgaatgactacaggttatatggctgttgga ccaatggctcctttctatgtctttccatgtgggcatgcatttcatgcacaatgcctgatt gctcatgttacaaggtgtactaatcaagctcaagctgaatacattctggatctgcagaag caacttactttacttggggctgaacctaagaatgtgtcaaatggtggcttgtctgaagaa ccgcttgctagcgtgacacccatgcataagatccggtcgcagctggatgatgctgtagct agtgattgcccattttgtggcgaccttatgatccgagagatttccttgcctttcatctta ccagaagaagcagaagaatccgaatcgtgggagataaagccgcataatcatcctagtcag agaagcctttctttggctgtgtga

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