Solanum stenotomum: 125872829
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Entry
125872829 CDS
T08385
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
sstn
Solanum stenotomum
Pathway
sstn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125872829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125872829
03016 Transfer RNA biogenesis [BR:
sstn03016
]
125872829
03012 Translation factors [BR:
sstn03012
]
125872829
04131 Membrane trafficking [BR:
sstn04131
]
125872829
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125872829
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125872829
Transfer RNA biogenesis [BR:
sstn03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
125872829
Translation factors [BR:
sstn03012
]
Eukaryotic type
Elongation factors
125872829
Membrane trafficking [BR:
sstn04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
125872829
Exosome [BR:
sstn04147
]
Exosomal proteins
Proteins found in most exosomes
125872829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
FlpD
Motif
Other DBs
NCBI-GeneID:
125872829
NCBI-ProteinID:
XP_049409584
LinkDB
All DBs
Position
8:48148431..48150169
Genome browser
AA seq
448 aa
AA seq
DB search
MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVVKNVDKKDPTGAKVTKAAQKKGK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagattcacatcagtattgtggtcattggtcatgtcgactctggaaag
tcaaccacaactggtcacttgatctacaagcttggtggtattgacaagcgtgttattgag
aggtttgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcctgggtgctt
gacaaacttaaggctgaacgtgagcgtggtatcactattgatattgctttgtggaagttt
gagaccactaagtactactgcactgtgattgatgcccccggacacagggactttatcaag
aacatgatcactggtacctcccaggccgactgtgctgtcctcattattgactccaccact
ggtggttttgaagctggtatctctaaagatggtcagacccgtgaacatgcattgcttgct
ttcacccttggtgtcaagcaaatgatttgctgctgcaacaagatggatgctaccaccccc
aagtactccaaggctaggtacgatgaaattgtgaaggaagtttcttcgtacctcaagaag
gttggttacaaccctgacaaaatcccatttgtccccatctctggttttgaaggagataat
atgattgagaggtctaccaacctcgactggtacaagggaccaaccctccttgatgctctc
gaccagattaatgagcccaagaggccatcagacaagccactccgtctcccacttcaggat
gtttacaagattggtggtattggaactgtcccagttggtcgtgtagagactggtgtgatc
aagcctggtatggttgtgacctttggccctactggtttgacaactgaagtcaagtctgtt
gagatgcaccacgaagctcttcaggaggcgctccctggtgacaatgttgggttcaatgtt
aagaatgttgctgttaaggatctgaagcgtggttttgttgcctcaaactccaaggatgac
ccagctaagggtgcagccagtttcactgcccaggtcatcatcatgaaccatcctggccag
attggaaatggatatgcaccagtgctcgactgccacacttcccacattgctgtcaagttt
gctgagatcttgaccaagattgacaggcgttcaggtaaggaacttgagaaggagcctaag
ttcttgaagaatggtgatgcaggtatggttaagatgattcccactaagcccatggttgtt
gagacctttgctgaatatccaccattgggtcgttttgctgttcgagacatgaggcaaact
gttgctgttggtgttgtcaagaatgttgacaagaaggacccaactggtgccaaggtcacc
aaggctgcgcagaagaagggaaagtga
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