KEGG   Solanum stenotomum: 125872852
Entry
125872852         CDS       T08385                                 
Name
(RefSeq) elongator complex protein 2 isoform X1
  KO
K11374  elongator complex protein 2
Organism
sstn  Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sstn03016]
    125872852
Transfer RNA biogenesis [BR:sstn03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    125872852
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_Aladin EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd ANAPC4_WD40 NBCH_WD40 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 WD40_RFWD3
Other DBs
NCBI-GeneID: 125872852
NCBI-ProteinID: XP_049409608
LinkDB
Position
8:57054950..57064329
AA seq 829 aa
MQNMEVERVFIGAGCNRVVNNVSWGASGLVSFGAQNGVAIFCPKTAQILTTLPGHKASVN
CTLWLPNSKFAFKAKQLEQHFLLSGDAEGVIILWEYSLVDAKWRYVLQVPQTHKKGVTCI
TAIMVSQQEAVFASASSDGTVNVWEVVFPSTRGGDCKLSCSDSLFVGQKPMVALSLAELP
GNSKQLVLAMGGLDNKIHLYCGERNGKFLRACELKAHTDWIRSLDLSLPVYVNGETSLLL
VSSSQDKGIRIWKMTLQDSSASNKKQQTSLASYIKGPVLVAGSSSYQISMESLLIGHEDW
VYSVEWQPPSTSSVEGIECFQPQSILSASMDKTMLIWQPEKTTGIWMNVVTVGELSHCAL
GFYGGHWSPNADSILAHGYGGSFHLWKNVGIEYDDWKPQKVPSGHFAAVSDIAWARCGEY
MMSVSHDQTTRVFAPWLNNTSVENEESWHEIARPQVHGHDINCVTVIKGKGNHRFVGGAD
EKVARVFESPLSFLKTLSHVTSDNSSFSADIQADVQILGANMSALGLSQKPIYVQAASTP
TDRSNTEGFDTLETVPEAVPVVLTEPPIEEQLAWHTLWPESHKLYGHGNELFSLCCDHDG
KLVASSCKAQSAPVAEIWLWQVGSWKSVGRLQSHSLTVTQMEFSHDNQYLLAVSRDRHFS
VFQINHKGTDEINYQLVAKQEAHKRIIWSCSWNPFGHEFATGSRDKTVKIWAVETETSVK
LLLTLPPFKSSVTALSWLGIDSHSNRGLLAVGMENGLIELWNLNSRGGDGHLSVQNASPA
VKFDPFLCHVSTVQRLSWRNPQKSEDSETVQLASCGADHCVRIFSVTIT
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgcaaaatatggaagtagagagagtttttattggagcagggtgtaatagagtagtgaat
aacgtttcatggggtgcttctggtttagtttcttttggtgcccaaaatggtgtagctatt
ttctgtccaaagacagctcaaatcttgactacactacctggtcataaagcttctgtgaat
tgtaccctttggcttcccaatagcaagtttgcattcaaagctaagcagctggaacaacat
tttttgctttctggagatgcggaaggtgtaataattttgtgggagtattctcttgtggat
gcgaagtggagatatgtcttacaagtgccacaaacccacaaaaaaggtgttacctgcatc
acggcgatcatggtgtctcagcaagaagctgtttttgcatctgcatcctctgatggcact
gtgaatgtatgggaagtagtatttccatctactcgtggaggtgattgcaaattgtcatgc
tcggattctctgtttgttggtcagaaacctatggttgctctttcactagcagagctccca
gggaatagcaagcagctggttctggccatgggaggattggacaataaaattcatctatat
tgtggtgagagaaatggaaaatttcttcgtgcttgtgagttaaaggctcatacagactgg
attaggagtttagatctctcattgcctgtgtatgtgaatggtgaaactagtcttctactt
gtaagttcatctcaagacaaaggcattcgcatatggaagatgaccttacaggattcttca
gctagtaacaagaagcaacaaacgagcttggcttcttacattaaaggtcctgttcttgta
gctggctcatcctcttatcagatctctatggaatctctcctcattgggcatgaggattgg
gtatactcagtggaatggcagccgccatcgacttcttctgttgagggaattgagtgtttt
cagcctcaaagcattttatctgcatccatggataagacaatgttgatctggcaacctgaa
aagacaactggtatctggatgaatgtagttacggttggggaattaagtcactgtgctctg
ggattttatggtggccactggagtccaaatgcagattctattttagctcatggatatggt
ggatcttttcacctctggaaaaatgttggtattgagtatgatgattggaagccacaaaaa
gttccatccggacactttgctgcagtgtcggacatcgcctgggctagatgtggggaatat
atgatgtctgtcagtcatgatcagactactagagtatttgctccttggctcaacaataca
agcgtagagaatgaagaatcctggcatgaaattgctcgccctcaagttcatggtcatgac
ataaattgtgtcacagtaatcaaaggaaaaggaaatcatcgttttgttggcggggcagac
gagaaagttgcaagagtttttgaatctcctctatcctttctgaaaacgttgagccatgtt
acatcagacaactctagtttttctgctgacattcaagctgatgtgcagatattaggcgca
aatatgtctgctctaggtctatcgcagaaacctatttatgttcaggcagcatcgacacca
acagacagaagcaatacggaaggttttgatactctagaaactgttcctgaagcagttcca
gttgtcttgacagagccacctattgaagagcaattggcatggcatactctatggcccgaa
tcacacaaactttatggtcatgggaatgagcttttttctctatgttgtgatcatgatgga
aagcttgtagcttcatcctgcaaggctcaatcagcaccggttgctgaaatatggctttgg
caagttggttcttggaaatccgttggtcgtttgcagtctcatagtttaacagtgacccaa
atggagttctctcatgataaccagtatcttttggctgtttcaagagatcgccacttctct
gtttttcaaattaatcataaaggaactgatgagatcaattaccagctcgtagctaagcaa
gaagcacataaaagaataatatggtcatgttcttggaacccatttggtcatgaatttgct
actggttcaagggacaagactgtcaaaatatgggctgtggaaactgaaacctcggtgaag
ctactgttgacacttccacctttcaaaagcagtgtcactgccctgtcttggttaggtatc
gatagccatagcaatcgcgggcttctggcagtgggaatggaaaatgggctgattgaacta
tggaatctgaatagcagaggaggagatgggcatttatcagtccaaaatgcttctcctgct
gttaagtttgatccatttctatgccacgtctctactgttcaacgactatcttggagaaat
cctcagaagagcgaagattctgagaccgtgcagcttgcctcctgtggagctgatcattgt
gtgagaatattcagtgtaactattacctaa

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