Solanum stenotomum: 125872914
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Entry
125872914 CDS
T08385
Name
(RefSeq) actin-related protein 5 isoform X1
KO
K11672
actin-related protein 5
Organism
sstn
Solanum stenotomum
Pathway
sstn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125872914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125872914
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
125872914
INO80 complex (yeast)
125872914
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
SUKH-4
THEG
Motif
Other DBs
NCBI-GeneID:
125872914
NCBI-ProteinID:
XP_049409665
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All DBs
Position
8:30769171..31877934
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AA seq
721 aa
AA seq
DB search
MPFISKIERQSDYGSFNSSHPIVIDNGASYFRIGWAGENEPRVIFRNIVQRPRHKTTGET
VTVVGDHNPALLKYFDCTRSGPRSAFESNVVYQFEIMEYILDFGFDRLGADQSQIDHPIL
ITECACNPVQSRGKMAELLFESYGVPSVAFGVDAAFSYKYNQQLGICNDTGLAITSGFTT
SHVIPFINGEPVYEACCRTNVGGYHVTDYLKQLLSLKYPHHISKLTWERVEELKMEHCYI
AADYASEVQLFQRGDKEAEDKTRCWQLPWTPSPVEEPPSEEEIARKAALKEKQSQRLREM
AEAKRSSKINELENELKGLEFLLEELKGIEEDDEIVSFLVSRGYASKREVESAFAKVTQS
LRKAKGEQVPSEEKVDISAAEKYYLIDIPDDELSAEQLKEKRRQVFLKSTTEARQRAKQR
RLEEELEKEKEKKLEEQKRMENPECYLEQLRAKYKELSEKLEQRKRLKTNGNHANGNNNV
SGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGQRDEDWQLYKLMSRDNDDDDDDKP
DHDETELARISSRLREIDPTFFPGSESGASASEVPRFRPLTKEDFQIILGVERFRCPEVL
FNPNFIGIDQSGLDEMVGVSLRRLPSWVQGLEDKMTSSILVTGGSCLYPGMGERLEAGIR
MIRPCGTPIKVVRATDPIMDAWRGASVYATAMQFPQQTFSRTDYYEKGEDWLRRYKFKYT
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcatatcgaaaatagagaggcaatcagattacggttccttcaactcaagtcac
cctattgtcattgacaatggcgcttcctatttccgtattgggtgggcaggtgagaatgaa
cctcgcgttatcttccggaatattgttcagaggcctcgtcacaaaaccactggtgaaaca
gtaacagttgttggtgatcacaatcctgcgctactgaagtactttgattgcacacgttca
ggacctcgttcagcatttgagagcaatgttgtttatcagtttgagataatggaatatatc
ctggactttgggtttgatcgattaggtgctgatcagtcacagattgaccatcctatctta
attactgaatgtgcttgcaatccagttcaatctcgtggcaaaatggctgagcttctcttt
gagtcatatggagttccttcagtagcattcggtgtagatgctgcattcagctacaaatac
aaccaacagcttggaatttgcaatgatacaggccttgcaatcacctcaggatttaccaca
tctcatgtcatcccgtttataaatggagaacctgtctatgaagcgtgctgtcgaactaac
gttggtggctaccatgtcactgattatctgaagcagcttctttcactcaagtaccctcat
cacatatcaaagcttacatgggaaagggttgaagaattgaagatggaacactgttacata
gctgcagactatgcttcagaggttcaactatttcagaggggggataaagaagctgaagat
aaaaccagatgttggcaacttccttggactccatcaccagtcgaagaacctccatcagaa
gaagaaattgctagaaaggcagctttgaaggagaaacaaagtcaaagattgcgtgagatg
gctgaagcgaaaagatcctcaaaaataaatgaacttgaaaatgaattaaaaggtttggaa
ttcctcttagaggagctcaagggcattgaggaggatgatgaaattgtgtcgttccttgtg
agtagaggttatgcttctaaacgtgaagtggaatccgcttttgcaaaagttactcaatca
cttcggaaggccaagggtgagcaagttccaagtgaagagaaagtggatatttctgcagct
gagaagtattatctcattgatatacctgatgatgaactttcggcggagcagctcaaggag
aagagaagacaagtgttcctgaaatccacaactgaagcacggcaacgagctaaacaaagg
cgtctggaggaggagctagaaaaggagaaggaaaagaaacttgaggaacaaaagcgcatg
gaaaacccagaatgctatttggagcagttgcgagccaaatacaaagagctctctgaaaaa
cttgagcagcgaaagcgattgaagacaaatggtaaccatgcaaatggcaataataatgtt
tctggaggtgttggtcgcggggagaggttgaatgctgcccaaagagagaggatgcgtctg
ttaacaacggcagcatttgatcgagggaaaggtgaagatacgtttggtcaaagggatgaa
gattggcaactctacaagctaatgagtagagataatgacgatgatgacgatgataagcca
gatcatgatgaaactgagttggctcgcatctcctctaggcttcgggagatcgaccctaca
ttttttccaggatcagaatctggagcgtctgcctcagaggtgccacgtttccgtcctcta
acaaaggaggattttcaaatcatacttggggttgaaagatttagatgtcctgaagtttta
ttcaatcccaacttcattgggatagaccagtcagggttggacgaaatggttggagtgtca
ttgagaaggttgcctagttgggtacaaggcttggaggataaaatgacaagttcaatactt
gtgactggcgggagttgtctctacccaggtatgggtgagcgcttggaagcaggaattcgg
atgatcaggccatgtggaactcctataaaggttgtcagagcaacagatccaattatggat
gcatggcgtggtgcttcggtgtatgctactgctatgcaattcccacagcaaacattcagt
agaacggattattatgaaaaaggtgaagattggcttcgtagatacaagttcaaatacaca
atctaa
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