Solanum stenotomum: 125872962
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Entry
125872962 CDS
T08385
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125872962
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sstn01002
]
125872962
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125872962
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125872962
Peptidases and inhibitors [BR:
sstn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125872962
Ubiquitin system [BR:
sstn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125872962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
125872962
NCBI-ProteinID:
XP_049409740
LinkDB
All DBs
Position
8:complement(4895051..4914315)
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AA seq
1105 aa
AA seq
DB search
MASTSKNPGDMEMMPLLPPRGEGYQRSDAPVVTGNDGDNQLPEDPQTFTWKVVNFSRLNV
KKLYSDDFIAGGYKWRILIFPKGKNAEYLSMYLAAADSAALPSGWIIYADFSLSVVNQTQ
NDYSIRKETQHRFCSTASEWGFELFMSLAELYDRDKGYLVGDVCTIEAEVAVLSDSEYMS
YDSINSKKVTNFVGLKNQGATCYLNSLLQTFYHIPYFRKAVYHMPTTENDMPLALQNLFY
KLQFSDDSVATRELTKSFGWDSSDVFKQHDVEELNRLLCEKLEGKMKGTIVEGTIQQLFE
GHNMSYIECISVDYKSTHKETFNDIQLLVKGCSDVYASFDKYVEVDYLDGDNKYKSEVYG
LQDAKKGALFIDFPPVLQLHLKRFEYDNMRGNDSKINDRYEFPLQLDLDRENGKYLSSEA
DRTVRNLYTLHSVLVHGGSVTGGHYYAFIRPTLSNQWYKFDDERVTKVDAKRALEEQYGG
QGKLPQTNPEYSFQISQNSNAYLLVYIRESDKEKIMCTVDQKDIGEHLRARFKRDQEDEE
QKKKEESEANLYTIIKVARDEDMQRQIGKDIYFDLVDHEKVKSFRIQRETLFSAFKEDIK
KEFRVPVQFQRYWLWAKRQNHTYRPDRPLTRLEEAQTVGQLRKVSNKFHNAELKLFLEVE
LGPELMLLSPPEKAKDDILLFFKLYDPEKEDMRYVGRLFAKGISNPMEILSKLNAMAGYA
PDQEIELYEEIKFEPSVMCENIDKNSTFRSNELEDGDIVCFQKSLTAESRQQFRYPDVPS
FLEYVHNRQVVHFRSLDKPKEQGFCLELSRINTYDEVVGRIAQQLELDDPSKIRLTSHDC
LSQQPKPQPIKYRGLDYLVNMLVHYNKISDILYYEVLDIPLPEFQGLKPFKVAFRHATKD
EVVIHMISLPKQSTVDDVMKNLKTKVELSHPDAELRLLKVFCHKIYEILPTTEKIENIND
RYWMLRAEEIPEEEKNIGPHDRLVHVYHFNKEAAQNQMKIKNFGEPFLLIIREKETLAEL
KLRIQKKLQVPDEDFAKWKFAIVTFDWPEYLEDLDILLSRFQQRGNVSRAREQYLGLEHS
DGAFKRTHATHQNRHWREKPLRICD
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacatctaagaatccaggagatatggagatgatgccattgctgcctccacgt
ggtgaaggatatcagcgcagcgatgcaccagtagtaacaggaaatgatggggataatcag
ctaccagaggatccccaaacattcacttggaaggtagtgaacttctctaggttgaatgta
aagaagctctactctgacgattttattgctggaggctataaatggcggattttaattttc
cccaagggcaagaatgctgaatacttgtctatgtatctggctgctgctgattctgctgct
ttacctagtgggtggattatatatgccgacttcagtttgtcagtagttaatcaaactcag
aatgattactcaatcagaaaagagacacaacacagattctgttctacggcaagtgaatgg
ggtttcgaactctttatgtcacttgctgagctatacgatcgtgataagggttatcttgtt
ggtgatgtgtgcaccattgaagctgaggttgctgtgctatcagattctgagtatatgtcg
tacgactcaataaactcaaaaaaagtcactaattttgttggactcaagaatcaaggagct
acatgttatttgaactctctgctccagactttctaccatattccttacttcaggaaggct
gtataccacatgcctacaactgagaatgatatgcccctggccttgcaaaatttattctac
aagctccaattcagtgacgacagtgtagcaacaagggagttgacaaagtcatttgggtgg
gactcttctgacgttttcaagcagcatgatgtggaagaactcaatagacttctatgtgaa
aagcttgagggaaagatgaagggaaccattgtggagggtaccatacaacagttatttgaa
gggcacaatatgagctacattgagtgtatcagtgtggactacaaatctacgcacaaggag
acatttaatgatattcagcttcttgtcaaaggttgttctgatgtttatgcttcttttgat
aaatatgttgaagttgattatcttgatggtgataacaaatataagtcagaggtatatggt
ttgcaggatgcaaagaagggtgcgttgtttattgatttcccccccgtcctgcagcttcat
ttaaagcgctttgaatatgataatatgcgaggcaatgattcaaagataaatgaccgatat
gagttccctttgcaacttgatctggacagagagaatggtaaatacttgtcttccgaggct
gatagaactgtcagaaacctttacacacttcacagtgtattagtccatgggggtagtgtg
acaggtggacactattatgctttcatacggccaactctttcaaaccagtggtataaattt
gatgatgaaagagtgactaaagtagatgcaaaaagggcattagaagagcaatatggtggt
caagggaagttgccacagacaaatcctgaatacagctttcaaatttctcagaactcaaat
gcttacttactggtctatatacgagaaagtgataaagagaaaataatgtgtactgttgat
cagaaggacataggtgaacacctgagggcaaggtttaaaagagatcaagaggatgaagag
cagaaaaagaaggaagaatcagaggcaaacctttacacaattataaaggttgctcgcgat
gaagatatgcaacggcagattggaaaggatatatattttgatctagtggatcatgagaaa
gttaagagtttccgcattcaaagagagacactttttagtgctttcaaggaggatatcaaa
aaagagtttcgtgtaccagtgcaatttcaacgttattggctctgggccaagcgtcagaat
cacacgtatcgtcctgatcggccattgacccgtcttgaagaagctcaaactgttggacaa
ctgaggaaagtgtccaataagtttcacaatgcagagctaaaattgtttctggaagtagag
ttgggaccggaactaatgctcctctctccaccggaaaaggccaaagatgatattctgctt
tttttcaagctttatgatcctgagaaagaagatatgcggtatgttggaaggctctttgcg
aagggaatcagtaatcccatggaaatcttgagcaaactaaatgcaatggctggctatgcc
ccagatcaagagattgagctttatgaggaaataaagttcgaaccaagtgtcatgtgtgaa
aacattgacaagaactccacttttcgatcaaatgagcttgaggatggtgatatagtatgc
ttccaaaaatctctaacggctgaaagtcgacaacaatttcgttatcctgatgttccttca
ttcctggagtacgttcacaatcgccaggtcgttcatttccgatctttagataaacccaag
gagcagggtttctgtttagagctgtctagaatcaatacatatgatgaagttgtgggaaga
attgctcaacaactcgagttggatgatccctccaaaattaggctcacatcccatgactgc
ttgtctcagcaacctaaacctcaaccaataaaataccgaggtttagactaccttgtaaat
atgctggtccactacaataagatttctgatatattgtactatgaagtattggacattcct
ttgccagaatttcaaggtttgaaaccctttaaagtagcttttcgtcacgctaccaaagat
gaagtggtcattcacatgatcagtctaccaaaacaaagtactgtggatgatgtaatgaaa
aatctaaagacaaaggttgagttgtcgcatccagatgcagagttaagattactaaaggta
ttctgccataagatttacgagatactgccaactacagagaagatagaaaacataaatgac
cggtactggatgctacgggccgaagagatacctgaagaagagaaaaatattggcccacat
gatcgtttggttcatgtataccactttaataaggaggcagcacaaaaccaaatgaaaatt
aaaaattttggggaaccttttctcttgattatccgcgagaaggagacattagctgaactt
aagctgcgtatacagaagaaattgcaggtcccagatgaagattttgctaagtggaaattt
gcaatcgtcacgtttgattggcctgagtaccttgaggacttggacatcttgttgagtcgt
ttccagcaaagggggaatgtctctcgtgctcgggagcagtatcttggattggagcattct
gacggtgcttttaaaagaacgcatgcaacacatcagaatcgccactggcgtgagaagcct
ttgagaatatgcgactag
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