Solanum stenotomum: 125872979
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Entry
125872979 CDS
T08385
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
sstn04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125872979
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125872979
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125872979
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125872979
03036 Chromosome and associated proteins [BR:
sstn03036
]
125872979
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125872979
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125872979
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125872979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
125872979
NCBI-ProteinID:
XP_049409762
LinkDB
All DBs
Position
8:complement(10300008..10312219)
Genome browser
AA seq
512 aa
AA seq
DB search
MNAGDGGAPAGTPAPLEWKFSQVFGERTAGEEVQEVDVISAIEFDRTGDHLATGDRGGRV
VLFERTDAKEHAGSRRELERMDYPITRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIR
WCQMANGALFLLSTNDKTIKFWKVQEKKVKKISDLNIDPSRDVANGSMPSSSVSSSQKQY
LVNGCYTDGSSECLSNDLSFPPGGLPALRLPVVTSGETSLAARCRRVYAHAHDYHINSIS
TNCDGETFISADDLRINLWNLQISNQSFNIVDVKPTNMEDLTEVITSAEFHPTHCNILAY
SSSRGSIRLVDMRQSALCDSHSKLFEEQETPGSRSFFTEIIASISDIKFAKAGRYILSRD
YMTLKLWDINMDSGPVSTFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGSRVATGSYSN
LFRVFGCAPGSMEATTLEASKNPRRQVQTPSRPSRSLSSSITRVVRRGSESPGGDANGNS
FDFTTKLLHLTWHPTENSIACAAANSLYMYYA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctggcgatggtggagctccggcgggaacaccagctccattggagtggaaattc
tctcaggtatttggtgaacggacggccggcgaagaagttcaggaagttgatgtcatctca
gctattgagtttgatagaactggcgaccatcttgccaccggggatcgagggggtagggtg
gtattatttgaaaggaccgatgcgaaggagcatgctggaagccgaagagaattagagaga
atggattatccaatcactcggcatcccgaattccgttacaagacagagtttcaaagccat
gagcctgagtttgattatttgaagagtttggagattgaggagaagatcaataagatccgg
tggtgccaaatggctaatggtgccctcttccttttgtctactaatgacaaaactattaag
ttctggaaggtccaagagaagaaggttaagaaaatatctgatctgaatatcgacccttcc
agagatgttgcaaatggcagcatgcccagttcaagcgtttcttccagtcaaaaacagtat
ctggtaaatgggtgctacacagatggatcttctgaatgtttaagcaatgatttgtcattt
ccacctgggggtcttcctgcattacgcttacctgtggttactagtggtgagaccagcctt
gctgctagatgtagaagagtgtatgcccatgcacatgactatcatatcaattctatttca
actaactgtgatggggaaacatttatatcagctgatgatctccgtataaacctttggaac
ttgcaaataagcaatcaaagtttcaatattgttgatgtcaagccaacaaatatggaagat
ctaactgaggtgataacttcagctgaatttcaccctactcactgtaacatattggcttat
agtagttcaagaggatcaatacgtttggtagatatgcggcagtcagccttgtgcgactcg
cactctaagttgtttgaggagcaggaaactcctggctcaagatccttttttaccgagata
attgcttcaatttcagatataaaatttgcaaaggctggaagatacatactcagtcgtgac
tatatgaccctgaagctgtgggatataaacatggattctggtccagtttcaacttttcag
gttcatgaacatttgagaccaaagctatgtgatttatatgagaatgattccatctttgat
aaatttgagtgttgccttagtggtgacggttcacgagtagcaactggatcttatagcaat
ctttttcgtgtgtttggttgtgctccgggaagcatggaagcgactacattagaagcgagc
aaaaaccccaggagacaagttcagaccccttcgaggccttccaggtccttgagcagcagt
ataacacgtgttgtcaggagaggatcagaaagtcctgggggtgatgccaatggaaactca
tttgatttcacaaccaaactgctccaccttacatggcatccaactgaaaattcaattgca
tgtgctgctgcaaacagcttgtacatgtattatgcataa
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