Solanum stenotomum: 125873000
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Entry
125873000 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125873000
KO
K11097
small nuclear ribonucleoprotein E
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125873000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125873000
03041 Spliceosome [BR:
sstn03041
]
125873000
03032 DNA replication proteins [BR:
sstn03032
]
125873000
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
125873000
Spliceosome [BR:
sstn03041
]
Complex A
U1 snRNP components
Sm proteins
125873000
U2 snRNP components
125873000
Complex B
U1 snRNP components
125873000
U4/U6.U5 tri-snRNP components
125873000
Complex C
U2 snRNP components
125873000
DNA replication proteins [BR:
sstn03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
125873000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
125873000
NCBI-ProteinID:
XP_049409793
LinkDB
All DBs
Position
8:complement(6108036..6111123)
Genome browser
AA seq
88 aa
AA seq
DB search
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDQRIEGRIIGFDEYMNLVLDDAEEV
NVKKNSRKQLGRILLKGDNITLMMNTGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctagcaccaaagtacagaggattatgacccagcccattaatctgatcttcagattt
cttcagagtaaagcgcgcattcagatatggctatttgagcagaaggatcagaggattgaa
ggacgtattattggttttgatgagtacatgaatttggttctggatgatgccgaggaagtc
aatgtgaagaagaatagcagaaagcagttagggcggattcttctgaaaggagataatatc
acattgatgatgaacacggggaaatga
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