Solanum stenotomum: 125873009
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Entry
125873009 CDS
T08385
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125873009
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125873009
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
AAA_22
RsgA_GTPase
AAA_28
AAA_16
AAA_15
AAA_24
VapE-like_dom
Ig_F54D1_6_2
Motif
Other DBs
NCBI-GeneID:
125873009
NCBI-ProteinID:
XP_049409807
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All DBs
Position
8:complement(3897083..3904549)
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AA seq
603 aa
AA seq
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MVSDASKKREAQKKAAAAAKRGGKSKAAVMKAAAAATATPPESNDVDELTNGVGDIQLSD
RTCTGVLCSHPLSRDIRIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLSA
IGCRELPIPDHMDIFHLTREIEASDMSSLQAVISCDEERLRLEKEVEVLAAQDDGGGEQL
ERIYERLEALDASTAEKRAAEILFGLGFNKKMQEQKTRDFSGGWRMRIALARALFMNPTI
LLLDEPTNHLDLEACVWLEETLKKFDRILVVVSHSQDFLNGVCTNIIHMQNKKLKLYTGN
YDQYVQTREELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERG
GLTEKGAKDKVLVFRFPNVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVG
PNGAGKSTLLKLMTGELVPLDGMVRRHNHLRIAQFHQHLAEKLDMELSALQFMIKEYPGN
EEEKMRASIGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAFRQPHMLLLDEPTNHLDIET
IDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCENQTVTRWEGDIMDFKLHLKARAGL
GDE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggatgcgagtaagaagagagaagcgcagaagaaggcagcagcagctgcgaag
agaggagggaagtctaaggcggcggtgatgaaggcggcagcggctgcaacagctactccg
ccggagagtaatgatgtcgatgaattaacgaatggggtaggagatattcagttgtctgat
cggacttgtaccggtgttttatgttcacatccactttccagagatattcggatagaatcg
ttatcacttacttttcacggacatgatcttatagttgattctgaactggagcttaactat
ggaagacgttatggtttgcttgggcttaatggctgtgggaagtctactcttctttctgct
ataggatgtcgtgaacttcccatcccagatcatatggatatctttcatctaacgcgggag
attgaagcgtctgacatgtcctcacttcaagctgttattagttgcgatgaagagaggttg
agattggagaaagaagttgaagtcttggctgcacaggatgatggtggtggagagcaactt
gaacgcatctatgagcgtttggaagctttggatgcatcaactgctgagaagcgtgcagct
gaaatcctgtttggtcttggatttaacaagaaaatgcaagaacaaaaaacacgagatttt
tccggtggatggaggatgagaattgctcttgctcgtgccctgtttatgaatccgaccatt
ttgctgcttgatgaacccaccaatcatctagacctagaggcttgcgtgtggttagaagaa
accttgaagaagtttgaccgtattctggttgttgtttcacactcgcaagactttctaaat
ggtgtgtgtactaacatcatccatatgcaaaataagaagttgaagctctacaccggtaat
tatgaccaatatgtccaaacccgtgaggagttggaagaaaatcagatgaaacagtacaga
tgggagcaggagcagattgcttcaatgaaggagtacattgctcgttttggacatggatct
gccaaactagcccgtcaagcacaaagcaaagagaaaacactggctaagatggagcgtgga
gggcttacagagaagggggcgaaggacaaggttctggtcttccgttttcctaatgttggc
aaacttcctcctcctgttctgcagtttgtggaagtgacatttggctacacccccgataat
ctcatttacaagaacctagattttggtgtagaccttgattcaagggtagcactggtggga
cctaatggagctggaaagagcaccctacttaagctgatgacaggggagttagttcccctt
gatggcatggttaggaggcataatcacctgcggattgcgcagttccaccagcacttggct
gagaagcttgacatggaattgtctgctctacaattcatgataaaagagtatcctgggaat
gaggaggagaagatgagggcatcaattgggaggtttggccttactggtaaagctcaagta
atgcctatgaaaaacttgtcagacggtcaacgtagccgggtaatatttgcgtggttagct
tttaggcaacctcacatgctgcttctcgatgagccaaccaaccatcttgatattgagaca
attgactcacttgccgaggctttgaatgaatgggacggtggcatggttcttgttagtcat
gatttcaggctcataaaccaggttgcccatgagatatgggtatgtgaaaatcaaactgtg
acacggtgggagggtgacattatggacttcaagctacatttgaaggcgagggcaggattg
ggtgatgagtga
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