Solanum stenotomum: 125873034
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Entry
125873034 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125873034
KO
K13114
pinin
Organism
sstn
Solanum stenotomum
Pathway
sstn03013
Nucleocytoplasmic transport
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125873034
03015 mRNA surveillance pathway
125873034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125873034
03041 Spliceosome [BR:
sstn03041
]
125873034
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125873034
Spliceosome [BR:
sstn03041
]
Complex C
Other components
EJC/TREX
125873034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
DNA_pol3_delta
Motif
Other DBs
NCBI-GeneID:
125873034
NCBI-ProteinID:
XP_049409838
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Position
1:complement(7133485..7138152)
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AA seq
417 aa
AA seq
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MASGVVEKTEEELRKELFELNRQQREITERLKDPRGLRRGGFSGGGPRNFVANGGRQRGV
VRPAERNDAEDQPAPKRRISSAVVKIEEGEIAEDVSGAPRDANKEESIVEASPREAPANH
NERKPSNWLRRDGYQRPSKMDFDIPPPEPVPRVLPKNEDPKLVSRNKRMLGQLLGTLEKF
RKEDMQLSGTEAYMRRSDSLKRAEQRAREDSEKLRQQEREQLDEKLKRDLTLRARLAAKA
EEKRLELLFLRWSEHHKKLANFIRTKAEPPIFYSFAKPLEEDPTLLEQRKDQIFEEWKAA
RREELSQYQKKIAEQNVAKAEEEWKTILERRANKNVANLQETMDKELETHRLERGPKTRK
IPGVSNNEDEDVEDINVAEDDMMDDVLEVDENNQRSDENVKVEAGNGSPQIDNNDEQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcgtagtggagaagacggaggaagagcttcgcaaagaactctttgaactc
aataggcaacaacgcgagattactgagcggcttaaggatccaagaggtcttcgccgtggt
ggattctccggcggaggtccacggaattttgttgccaatggtggtcgccaacgcggcgtt
gttagacctgcggagaggaatgatgcagaggatcagccagcacctaaaaggcgtatttct
tctgctgttgtgaagattgaagagggggagattgctgaggatgtatccggagcaccaagg
gatgcaaataaggaagagtcaattgtggaggcaagcccaagggaggcacctgccaaccac
aatgaaagaaagccatccaattggctccggagagatggctatcaaaggccatccaaaatg
gattttgatatacctccaccagagcctgtgcctagagtgttgcccaaaaacgaggatcct
aaattggttagtaggaataagagaatgttggggcagctgctggggaccttggagaaattc
cggaaagaagacatgcagctttctgggactgaggcttacatgcggaggtcagattctttg
aaaagggctgagcaaagggcgcgcgaagacagtgagaaattaagacaacaagagcgggag
cagcttgatgaaaagctgaaaagagatctgactcttcgagcacgtcttgctgctaaagct
gaggagaagaggctggaattgctgtttcttcggtggagtgagcaccacaaaaaactagcc
aattttataaggaccaaagccgagccaccgatcttttattcttttgccaaaccattggaa
gaagatccaaccttacttgagcagagaaaagatcagatattcgaggaatggaaagctgca
aggagagaggaattgtcgcaataccagaaaaaaattgctgaacaaaatgttgcaaaagct
gaggaggaatggaaaactattttagaaaggagagccaacaaaaatgtagcaaaccttcaa
gaaacgatggacaaagagctagagactcataggcttgagcgtggacccaagactcgaaag
attcccggtgtcagcaacaacgaagatgaggatgttgaggatatcaatgttgcggaggat
gatatgatggatgatgtgcttgaagtggatgagaataaccagaggagtgatgaaaatgta
aaagttgaagcaggcaatggtagtccacagattgataacaatgatgagcagtag
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