Solanum stenotomum: 125873068
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Entry
125873068 CDS
T08385
Name
(RefSeq) autophagy-related protein 18c-like
KO
K22991
WD repeat-containing protein 45
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125873068
Membrane trafficking [BR:
sstn04131
]
Autophagy
Other autophagy associated proteins
Others
125873068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
BCAS3_WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_RSE1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
CFAP251_N
Beta-prop_Vps41
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
125873068
NCBI-ProteinID:
XP_049409890
LinkDB
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Position
8:24489938..24502546
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AA seq
416 aa
AA seq
DB search
MTTLSSPNSSTVSPSRGTISPAAFGTYESPMPGDSHSGHSEPAISDNDETELHFVSWNQD
YSCFAAGTSRGFRVYNCDPFKETFRRDLKSGGFGIVEMLFRCNILALVGAKANTQYPPNK
VIIWDDHQSRCIGEFSFRSEVRAVKLRRDCIVVVLEHKIYVYNFMDLKLLHQIETVANPR
GLCCLSHQLNTSVLACPGLRRGQIRVEHFGLNMTKLIKAHDSQIACLTLTIDGLLLATAS
TRGTLIRLFNTIDGTQLQEVRRGVDRADICSIALSPNVQWLVVSSDKGTIHVYSLRVRVV
GEDASADATVRTPTLLCQNSSASLDALISPSTGANPGSSLSFMKGVLPKYFSSEWSFAQF
HLPECTQYIAAFGSQNTIITAGTDGSFHRCSFDPVNGGEMVQQEYVRFLKTESRPR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgactactctatcatcgcccaatagttcaactgtttcaccttctcgagggacaatttct
ccagcagcctttgggacatatgaatctcccatgcctggggactctcattctggccattct
gaaccggcgatcagtgataatgatgaaacagagctacactttgtatcatggaatcaggat
tacagttgctttgctgctggcacaagtcgtggctttcgtgtgtataactgtgatcctttc
aaagagactttcagacgcgatctgaaaagtggtggatttggaatagtggagatgctgttc
cgatgcaatattttagcacttgtgggtgccaaggccaacactcaatacccacctaataaa
gttattatatgggatgatcatcaaagccggtgcataggtgaattttcatttaggtctgag
gttcgtgcagtgaaactaagacgggattgtattgttgtagttcttgagcacaagatatat
gtctacaactttatggatctgaagcttcttcatcagatagagactgtggccaatcctagg
ggactttgctgcctctcgcaccagttaaatacatctgtattggcttgcccaggccttcga
agaggacagatccgggttgaacattttggcctgaatatgacaaagttaatcaaggctcat
gattctcagatagcatgcctaaccttgacaattgatgggctgcttcttgcaacagcaagc
actcggggaactttgataagactcttcaacaccattgatgggactcagttgcaagaggtg
cgtagaggggttgacagagcggatatctgtagtattgctctatcaccaaatgttcagtgg
ttggtcgtctcgagcgacaaaggtactatccatgtatacagccttagagtacgtgttgtt
ggggaggatgcttcagctgatgcaactgttagaactccaacgttgttgtgtcagaattca
tcagcttctcttgatgcacttatttctccaagtactggagccaaccctggttcatcactg
tctttcatgaaaggagttttgccaaaatactttagctctgaatggtcatttgctcaattt
cacttgccagaatgtacccagtacattgctgcgtttggttctcagaacaccattataact
gctggcactgatggaagtttccataggtgcagcttcgatcctgtgaatggaggagaaatg
gtacagcaggaatatgtccgctttctgaaaacagaaagtaggccgagatag
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