Solanum stenotomum: 125873124
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Entry
125873124 CDS
T08385
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125873124
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125873124
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF2576
Motif
Other DBs
NCBI-GeneID:
125873124
NCBI-ProteinID:
XP_049409960
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Position
8:complement(6508011..6511430)
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AA seq
405 aa
AA seq
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MATSSLSLIFLLSSLLLIPSLLASSPLQNHQYVVDQVHRSINVSRRNLGYLSCGTGNPID
DCWRCDPNWEKNRQRLANCAIGFGKNAVGGRDGKIYVVTNSGNDDPVNPKPGTLRYGVIQ
DEPLWIIFARDMVIQLKEELIMNSFKTIDGRGANVHIAGGPCITIQYVTNVIIHGIHIHD
CKQGGNAMVRSSPHHYGWRTISDGDGVSIFGGSHIWIDHCSLSNCVDGLIDAIMGSTAIT
ISNNYMTKHDKVMLLGHSDSHVQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYT
HWEMYAIGGSANPTINSQGNRFLASDFTFSKEVTKHEISPESEWKNWNWRSDGDLMLNGA
FFVKSGAGASSNYAKASSLSAKSSSLISSLVSGAGALSCREGSHC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcctctctttctctcattttccttttgtcctctcttctcttaattccttca
ctccttgcctcttctcccttacaaaatcatcaatatgttgttgatcaagtacataggagc
ataaatgtgtcaaggaggaacttagggtatttgtcttgtgggacaggaaaccctatagat
gactgttggcgttgtgacccaaactgggagaaaaaccgtcaaaggcttgctaattgtgct
attggctttggtaaaaatgccgttggtggtagagacggaaaaatatacgtcgttaccaac
tctggtaacgacgatcctgttaaccctaaaccggggactctccggtatggggttattcaa
gatgagccattatggattatttttgctagggatatggtgattcaactgaaagaagaactt
attatgaactctttcaagactattgatggaagaggagctaacgttcacattgcaggtgga
ccatgcataacaatacaatatgtgaccaatgtgatcatccatggaattcacatacatgat
tgtaagcaaggtggaaatgctatggtgaggagctccccacatcactatgggtggagaact
atatcagatggtgatggagtgtccatatttggtgggagtcatatttggatagatcattgt
tccttgtctaattgtgttgatggtttgattgatgctataatggggtccacagcaattacc
atatctaacaattacatgactaaacatgataaagtgatgttattgggacatagtgattcc
catgtccaagacaagaacatgcaagtaaccattgctttcaatcactttggagaaggcctt
gtccaaagaatcccaagatgtagacatggttattttcatgtggtgaacaatgactatact
cactgggaaatgtatgcaattggtgggagtgctaatcccaccatcaatagccagggtaat
agattccttgcttctgattttacattcagcaaagaggtgacaaagcatgaaatttcacca
gaaagtgaatggaagaattggaattggaggagtgatggcgacttaatgttaaatggtgca
ttttttgtaaaatcaggagctggagcctcttcaaattatgctaaggcttcaagtttgagt
gcaaagtcttcttcactaataagttcccttgtgtccggggccggtgccctaagttgtcgg
gaaggttctcattgctag
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