Solanum stenotomum: 125873276
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Entry
125873276 CDS
T08385
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
sstn
Solanum stenotomum
Pathway
sstn04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
125873276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125873276
03029 Mitochondrial biogenesis [BR:
sstn03029
]
125873276
Membrane trafficking [BR:
sstn04131
]
Autophagy
Autophagosome formation proteins
ULK complex
125873276
Atg1 complex
125873276
Mitochondrial biogenesis [BR:
sstn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125873276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
125873276
NCBI-ProteinID:
XP_049410134
LinkDB
All DBs
Position
8:5626867..5632631
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AA seq
606 aa
AA seq
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MDFQSNPQSEYGRFEQILAQYLLKSLHIILNLRVPSIRSYGGFEEVKRSDKWFNMVLGDR
PAVFENLNLLHGEPTIIDIILVQDKDCTSLKHNSGKAFAGAYTETIIERWVVQCENRRSM
VPHMGDSSYKKMYKKSIILLRSVYSMLKLLPAFKAFKKLSSSSQSCYFDINFKVSSFSEP
FSRAEEEMMKQFTFTSVDAQQGRLSLSVTYRENLVDFNLESSASFPPEIITDYVGSPLTD
PLRSFPLNSTDKGVHNTSFPLRRTQSSCSAPVQHPQSWTSGLFRAPSLPQPYVGSPPLYH
APYEFSTSVSDVYGQMIPPNYKYSTHQKTTSFDDDQLSPPFSSSPSPPTYLSGANLVQTR
LHSETGPVSIPHPLIGRTSRHLSPNLSDPNRHYLPPMSPRCTKHDFSSHESPFGIRPSRK
IDLLRVPESDIGTTNPGQKVSTDARDDSGRFSGVLSSSDSPRVGVSRSSSSRLSFQDDLD
DCDFSCPFIVDDVDTSDSRARENLDCRKCSEASCKVSATARKSQDAAVGALVHMLRTAPP
LRQDSTCYTAHSIKGEVEGETGTASQFYVPRKASDALEELKAYTQLKAILLPKSMTRSSS
DGGNFA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagagtaacccacagagtgaatatggaagatttgagcaaatacttgctcaa
tatcttctaaaaagcttgcatatcattttgaacttgagggttccttcgataagatcatat
ggtgggtttgaagaagtgaagaggagtgacaagtggttcaatatggtgttgggagatcgt
cctgcggtttttgaaaacttgaatctgttgcacggggagccgacgataatagatataata
ctcgttcaagataaagattgtacttcattgaagcacaattcaggtaaagcatttgcaggg
gcatatacagaaaccattatagagaggtgggtcgtgcaatgtgagaatcggaggtcaatg
gttcctcacatgggtgattcctcttacaagaaaatgtacaagaagtctattatactactc
cgttccgtttattcaatgttgaagctcctgcctgcattcaaggccttcaagaaactatct
tcgtcaagtcagagttgttattttgatattaattttaaggtatcttcatttagtgagcca
ttctcaagggcagaggaggagatgatgaaacaatttacttttacttcagttgatgcccag
caaggccgtctttccttatctgtgacatatcgtgaaaatctggtggacttcaacctggag
agttctgcatcctttccgcctgagatcattacagattatgttggtagtccactcactgat
cctctgaggtcattccctttgaactcaacggataagggtgttcataatacttcatttcca
ttgagaaggacacagtcctcttgttcagcacctgttcagcacccacagagttggacaagt
ggtctcttcagggcaccttctttacctcagccatatgtaggatctccacctttgtaccat
gcaccatatgagttttcaacttcagtcagtgatgtatatggacagatgattccacctaac
tacaaatattcgactcaccagaaaacaactagttttgatgatgaccagctttcccctcca
ttttcatcatcaccatctccacccacatatctctcaggtgcaaatcttgtgcagactcgt
ttgcattcagaaactggtcctgtcagtatccctcatccattgataggaagaacttccaga
cacctatctcctaatttgtctgatccaaacaggcattatctcccacctatgtcacctaga
tgcacaaagcatgatttttcatcccatgaatccccttttggaatcaggccatcaaggaaa
atagatttgctaagggttccagagtcagatattgggactactaatcctggacaaaaggtg
tctacagatgctagagacgattcagggcggttctcaggtgtgctctcttcaagtgattca
ccacgtgttggagtttctagaagttccagcagcagattatcttttcaggatgacttggat
gactgtgatttttcctgtccttttatagttgatgatgttgatacttctgattcccgagcc
agagagaaccttgattgcagaaagtgttcagaggcctcgtgtaaagtatctgcaacagcc
agaaaatctcaagatgctgctgtaggtgcccttgttcacatgctgagaactgctccccct
ttgcgtcaagattctacttgttatactgcacattctataaagggagaagtagagggagaa
actggcactgcatctcagttctatgttcctaggaaggcatctgatgcattggaggagctt
aaagcttacacacaattgaaagctatcttacttcccaagagcatgacccgctcaagcagt
gatggtgggaactttgcgtga
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