Solanum stenotomum: 125873911
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Entry
125873911 CDS
T08385
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Module
sstn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125873911
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125873911
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta-prop_SCAP
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
125873911
NCBI-ProteinID:
XP_049410694
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Position
8:51618094..51622441
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AA seq
411 aa
AA seq
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MQGKKILVQILFILIGLTNSRIYSASIFGYPGSFNVLDYGAAADGITDDSQALLNTWNDA
CSSSAGSPQVIIPPNMIFLLSPMTLTGPCNSENIYFVISGSLVSPSSPSVWTGQDLSQWL
AFRNVSGLVVDGSGTIDGQGKGWWDQSCRYHPEMEGCTRLAPTALKFILCSQSSISNMYF
ANSAQTHILVEKCNGFNVNNVMIQSPGNSPNTDGIHIQSSQNVAITNSKISSGDDCISIG
DFSSNIQIYNIQCGPGHGISIGSLGKGGHSAQVENIHVNTVFFYGTTNGARIKTWQVGRG
YVRDVTFENLQFNSVKNPIIIDQNYCDVRGACKEMGTGVQISNVVYQNIYGTSSTDIAIN
LNCSMSVPCTDITMQLIQLTPATPGRQVKAYCRNANGQEYRIEPGPCLSGV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcaagaaaatattggttcagatcttgttcattttaattggcttgacaaattca
agaatatacagtgcaagtatatttggatatccaggaagttttaatgtactggattatgga
gctgctgctgatggcattactgatgattctcaagcattacttaatacttggaatgatgca
tgttcatcctcagctggatctcctcaagtgattattcctccaaatatgatatttttactt
agccctatgacactcacaggcccctgcaattcagagaacatctattttgtgatatcgggt
agtcttgtttcaccgagctcacctagtgtatggaccgggcaagacttgagtcaatggcta
gctttcagaaacgttagcggtctagttgttgatggctcaggaaccattgatggtcaagga
aaaggatggtgggatcaatcatgtagataccaccctgaaatggaaggatgcacaagacta
gctccaactgcgttgaagttcattctttgcagtcagagttccatcagtaacatgtacttt
gcaaacagtgcgcaaactcatatacttgtagagaaatgcaatggcttcaatgtgaacaat
gtaatgattcaatctccaggaaatagtccaaatactgatggaattcacattcaatcttct
caaaatgtggccattacaaattctaaaattagcagtggggatgattgcatttcaattgga
gatttctcttctaatatccaaatatataacattcaatgtggaccaggtcatggtataagt
attggaagcttaggaaaaggtggtcattctgctcaagtagagaacattcatgtgaacact
gttttcttctatggaactacaaacggagctcgtatcaagacatggcaggttggcagaggc
tatgtccgagatgtcacgtttgagaatcttcaattcaactctgtcaagaacccaatcata
attgaccagaattactgcgatgttcgaggggcttgcaaggaaatgggaactggagtgcaa
atcagcaatgttgtttaccagaacatatacggaacgtcgagcacggatatcgcgataaat
ttaaactgcagcatgtctgtgccatgtacagatataacaatgcaacttatacaactaaca
ccagcaacaccaggaaggcaagttaaagcttattgtaggaatgctaatggccaagaatat
cgaatcgaacctggtccttgtctctcaggagtttga
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