Solanum stenotomum: 125874054
Help
Entry
125874054 CDS
T08385
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sstn
Solanum stenotomum
Pathway
sstn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125874054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125874054
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125874054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_At5g56370
LRR_6
Motif
Other DBs
NCBI-GeneID:
125874054
NCBI-ProteinID:
XP_049410817
LinkDB
All DBs
Position
8:59747540..60032829
Genome browser
AA seq
350 aa
AA seq
DB search
MQADVFEVFVNVSQAFSGCNQLKGLSGFWDSVPAYFPTIYPVHSKLTSLNLSYATIQIPD
LGKLIGNCLNLQRLWVLDYIEDSGLEEIANTSKEIQELRVFPSDPFAPGPNVSLTEQGLV
AVSMGCPKLQSVLYFCRQMTNDALVTIARNRPNMIRFRLRISEPRTPDYLTLELLDAGFG
AIVQYCKELRRLSLSGLLTDRVFEYIGVHAKKLEILSLAFAGDSDLGLHYVLSGCESLRK
LEIRDCPFGDEALLANAAKLETMRSLWMSNCSVSFEACKLLSQKLPGLNVEVIDERGHLD
TTLESCPVEKLYIYKTVSGRRFDTPGFVWIIDEDAALTPCSNGNCSLASS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgatgtttttgaagttttcgtaaatgtatctcaagctttttcaggctgtaat
caactcaaaggcttgagtgggttttgggattctgtgccagcctactttccaactatttat
ccagtccattccaaactcacctctttgaatttaagctatgctaccattcaaatacctgat
cttggcaagctcattggcaactgtctcaatttgcagcggttgtgggtgctagattacatt
gaagatagcggtcttgaggagattgccaacactagtaaggaaattcaagagcttagggtg
tttccttctgatccatttgctccaggaccgaatgtatccttgacagagcaaggccttgta
gctgtctcaatgggctgccctaagcttcagtcagttttatacttctgccgccaaatgaca
aatgacgccttagttactattgcaaggaatcgtcctaacatgatccgatttcgtttgcgt
attagcgagcctcgaactcctgattacttaacccttgaactacttgatgctggttttggg
gccattgtgcaatactgcaaggaattgcggcgactttctctttctggccttcttacagat
cgtgtgtttgagtacatcggggtccatgctaagaagttagagattctttccttagctttt
gcgggggatagcgatctaggcctccactatgttctctctggttgtgagagccttcgtaag
ttggagattagagactgcccctttggcgatgaggctctgttggctaatgctgcaaagctg
gagacaatgcgatccctttggatgtctaattgttcagtaagttttgaagcatgtaagctg
ctatcccagaagttgccagggcttaatgttgaagttatagacgagaggggtcatctggat
acgacactagaaagctgccctgttgagaaactttatatatacaagacagtgtcaggaagg
aggttcgacactcctggttttgtttggattattgatgaagatgcagcattgactccatgt
agcaacgggaattgctctctggcttcttcttag
DBGET
integrated database retrieval system
