Solanum stenotomum: 125874151
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Entry
125874151 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125874151
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125874151
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125874151
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125874151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-rbx1
zf-RING_10
Rad50_zn_hook
Prok-RING_4
Zn_ribbon_6
zf-ANAPC11
zf-RING_4
zf-Nse
Sina_RING
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
125874151
NCBI-ProteinID:
XP_049410947
LinkDB
All DBs
Position
8:complement(56005023..56009279)
Genome browser
AA seq
215 aa
AA seq
DB search
MSSQDSSSQPIRRTRSQSRRNTLLNVDLNVAPPTENRDQEGDPIHVVPGDTPQGLRGASL
TAGAIDVEALDDDVIISSPRAFAAAKNNSRRNQGRVIVLDVDSEDRASRGNSRNRRRRVS
TNQATNNGDIYIDLEGHSCPKRVDLRSAIPAPPKEPTFSCPVCMGPLVDEMSTKCGHIFC
KACIKASIAAQGKCPTCRRKLAMKDTIRVYLPTTN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccaagatagtagctcacaaccaattaggcgtacaaggtcccagtcgagaaga
aatactttgctaaatgtggatctaaatgttgcaccgccaactgagaacagagatcaggaa
ggagatcctattcatgttgtgcctggggatacaccacaaggactaagaggtgcctctttg
acagctggagcaattgatgttgaggcacttgatgatgatgtgattatatcatcccctagg
gcgtttgcagcagctaagaacaactccagaaggaatcaaggacgggttattgtgcttgat
gtggattctgaggaccgtgcgtctaggggtaacagtcgcaacaggcgtagaagagtctct
acaaatcaagcaacaaacaatggtgatatttacatagacctagaaggacatagttgccca
aagagagttgatctaagaagtgcaataccagcaccaccaaaagagcctacattcagctgt
ccagtgtgcatgggtccattagttgacgagatgtcaacgaaatgtggtcacattttctgc
aaggcgtgcataaaagcatccattgctgctcagggaaaatgtcctacgtgtaggaggaaa
ctggccatgaaagacaccataagagtatatcttcccaccacaaattaa
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