Solanum stenotomum: 125874255
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Entry
125874255 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125874255 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
sstn
Solanum stenotomum
Pathway
sstn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125874255
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sstn01002
]
125874255
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125874255
03036 Chromosome and associated proteins [BR:
sstn03036
]
125874255
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125874255
Peptidases and inhibitors [BR:
sstn01002
]
Metallo peptidases
Family M67
125874255
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125874255
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
125874255
BRISC complex
125874255
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
125874255
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
125874255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
125874255
NCBI-ProteinID:
XP_049411059
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Position
8:9171167..9185308
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AA seq
420 aa
AA seq
DB search
MALTSVKMTEEVWLTCLSHALSTETEEIMGLLLGDTQQSKHGSVTALIWGALPQPRCDRR
KDRVETNPEQLTAASVKAERMTLATGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
AGFIGLIFSCFSEDAQKVGRIQVIAFQSLDGKQQNHMLLRPISLSPVHKNSVIDLESPLS
SADTSRAGSKIEILEQDTGDSRASALASKGGTRSTDLGNFFANVDNRVGENLHANSLSNA
VIDVDPMDMSESMQEAMHRSNLEMSGAEYVRKEIPLLVLPSSSLFNLDAPLNSFTDLQRV
LFEEERTAYNQAVVTNMRETKVHPLTFIHHTSTYQASMCKLMEYCLSPAISSLQDQLREN
EIRLKMLSEEAKVLETETIRGEPNTSSPRRGSASLGQRDLYSPTELRSVSGSSSRSRKAP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctctaacgagtgtgaaaatgacggaggaagtgtggttaacatgtctcagtcatgca
ttgtctacagaaacagaagagataatggggcttctcctcggtgatactcagcagtcaaaa
catggtagtgtgactgcacttatatggggagcactgccacagccacgttgtgacaggagg
aaggatcgtgttgagaccaatcctgagcagctaactgctgcatcagtcaaggctgagaga
atgaccctggcaacaggaagaacaacaagagtgattggctggtaccattcacatccccac
attacggttctcccttcccatgttgatgtccgcactcaagccatgtatcaacttctggat
gctgggtttattgggttgatattttcatgttttagtgaagatgcacagaaggtcgggaga
atccaagttattgcatttcagtccttggatggaaagcagcagaatcacatgttgttgagg
cctatttccctttcccctgtacataaaaattctgtaatagaccttgaatcgcctttaagt
tccgcagacacatctagagctggttcaaaaattgagattcttgaacaagatactggtgat
tcaagagcttctgccttagcttctaagggtgggacaagatccacggacttgggcaatttc
tttgctaatgttgataatagagttggagaaaaccttcacgccaacagtcttagtaatgca
gtcattgatgtagatccaatggacatgtcagaaagtatgcaggaagcaatgcatcgatcg
aatctggagatgagtggtgcagaatatgtcagaaaggaaatccctcttcttgttctgcca
tcctcatctcttttcaatcttgatgcacctttgaactcattcacggatctgcaacgggta
ttatttgaagaagaacgaactgcgtataatcaggctgttgtaacaaatatgagggaaaca
aaagtgcacccgctcactttcattcatcacacatctacatatcaggcttctatgtgcaaa
ttaatggagtattgcttaagtcccgccatcagttccctccaggaccagttgagagagaat
gaaattcggctaaagatgctaagtgaagaagccaaagttttggaaactgagactataaga
ggggaaccaaatacaagttctcctcgtcgaggtagtgcttcattgggtcaaagagacttg
tacagtccaaccgagttaagaagtgtttctggttcaagtagtaggagcagaaaagcaccc
taa
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