Solanum stenotomum: 125874304
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Entry
125874304 CDS
T08385
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125874304
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125874304
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
125874304
NCBI-ProteinID:
XP_049411122
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Position
8:complement(950976..957042)
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AA seq
434 aa
AA seq
DB search
MAAALRLSCLCFLQLLIVIVLFINSSADNSIEEAEQFQSLSNSTMANRLSGNDELWHEHA
VDDPEAIASMVDMSIRNSTERRKLGYFSCTTGNPIDDCWRCDRHWQRNRRRLADCSIGFG
RNAIGGRDGRFYVVTDSGDDDPVNPRPGTLRHAVIQDEPLWIVFKSDMHITLKQELIMNS
FKTIDARGVNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADG
DAISIFGSSHIWVDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVILLGHSDSYVRD
KVMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRYLA
PVNPFAKEVTKRVEPWEGSWKQWNWRSVGDLLLNGAYFTASGRAAPGSYARASSLAAKSS
SMVGMITSNAGALS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctctgagattatcgtgtttgtgttttcttcaattgctaattgtgatcgta
ctattcatcaattcttctgccgataacagtattgaagaagcagagcaatttcagagctta
agtaactcgactatggcgaacaggttaagtggaaacgatgaactttggcatgaacatgct
gtagatgatccagaagccattgcttccatggtggatatgagcattaggaatagcacagag
aggaggaaactgggttacttctcatgtacgacggggaatcctattgatgattgttggcga
tgcgatcgccattggcaacgtaatcgcagacggttagctgactgttcaattggctttgga
cgcaatgccattggtggccgagatggcaggttttacgttgtaactgactcgggtgatgat
gatccagtaaatccccgacctggaacacttcgtcacgctgtaattcaagatgaaccattg
tggatagtgtttaaaagtgacatgcacatcacacttaagcaagaactgatcatgaatagt
ttcaagacaatcgatgctcgtggtgtgaatgtgcatatcgcgaatggggcttgtattact
atccaatttgttactaatattatcattcatggtctccatattcatgattgtaaaccaact
ggtaatgccatggttagaagctcaccatcacactatggttggaggactatggcagatggt
gatgccatttccatttttggttcgagccatatttgggttgatcacaactctctttctaat
tgtgctgatggtctcattgatgctattatgggttcaactgcaattaccatttcaaacaat
tacttcacccatcacaatgaggtgattttattggggcacagtgactcctatgtaagagat
aaggttatgcaggtgactattgccttcaaccattttggtgagggcctaatccagagaatg
ccaagatgtaggcatggttatttccatgtggtgaacaatgactacacgcactgggagatg
tatgccattggtggcagtgctgctcctacaattaacagccagggtaacagataccttgcc
ccagtgaacccttttgccaaagaggtgacaaaaagagtggaaccatgggaaggatcatgg
aaacagtggaactggagatcagtgggagaccttttgttgaatggagcatactttactgca
tcgggacgtgctgctccaggcagctatgcaagagcctcaagcttggctgctaagtcctct
tccatggtcggaatgattacctcgaatgctggtgcactttcttga
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