Solanum stenotomum: 125874404
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Entry
125874404 CDS
T08385
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sstn03012
]
125874404
Translation factors [BR:
sstn03012
]
Eukaryotic type
Initiation factors
eIF-5
125874404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
125874404
NCBI-ProteinID:
XP_049411241
LinkDB
All DBs
Position
8:17792980..17801502
Genome browser
AA seq
1339 aa
AA seq
DB search
MGRKKPVRENESLESSKQGGGGGGKSKKKNRVIDDDDYSVGTELSEDTVVLEDKAELVPE
ISKKRGKKGKKSGARDEDVEETEDKLVRKEEDDEKKKLGGGEKNLAKQVGGGGKSKKKNV
AIDDDEYSIGTEISAETQEEELAPAVAFGKKKSKKGKKGGVSTSDYGSLGQDDDDEDVSG
LSRDRDGVVGDSDREAESVASVTGKTKNLRLGKSSASLSVTSVFHAIDDQDNETGQLSEE
DEESTVAFTGRSSGISFSAALLDEENDADTSLKLETEAIEEDDAPGIIFSGRKKSSKKKN
KSASSTIDTAFRNDSTNVADQDHCSLGVNREDADDNRGKKQTTDVLETSKNKTKKKKSGH
ASKILAGLGEGSTITTPAQPAHASLPQEEKSQQQSQLGDDTGERRAVEEAVKSAAAKKKK
KKEKEKEKKAAAAAAAVSEMEEKQEGTKNDTRAKLADKKQSKQVREMQERLKKMKEAEES
KKKEEEERLRKEEEEHLRLEELERLAEEKKHLKKEREKEKLLKKKLEGKLLTGKQKEEAR
RLEAMRKQFLASGGALPLYTGESRKDATKRPIYQSKKSKAQAWANGKVQEESVESTEVQE
NQQEIVSEVDSMETEKAEHIDLVSVEEKSEVPDAEENRVEEEEDEEWDARSWDDADLKLP
RKSAFEDEELDSDPQPIITKAARSVVSDTGPLPVAAKSVIPTQKAVASVPDVTKNDGSKK
REPVVVVSGQGTEKPGASSSKSEDNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGG
ITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAIL
VVDIMHGLEPQTIESLNLLKMRNTEFIVALNKIDRLYGWKVCRNAPIVKAMKQQSKDVQF
EFNTRLTQIVTQFKEQGINTELYYRNKEMGKDTFSIIPTSAISGEGIPDLLLLLVQWTQK
TMVERLTYSSEVQCTVLEVKAIEGHGTTIDVVLINGMLHEGDQIIVCGMQDPIVTSIRAL
LTPHPMKELRIKGSYVHHKEIKAAQGIKINAQGLEHAIAGTSLYVVGPDDDVENIKEAAM
EDMRSVMSRIDRSGEGVYVQASTLGSLEALLEFLKTDEVRIPVSGIGIGTVHKKDVMKAS
VMLEKKKEYATILAFDVKVTQEARELADEAGVKIFIADIIYHLFDQFKAYIDNLKEEKKK
EVAEEAVFPCSLKIVPNHVYNKKDPIVVGVDVLEGIARVGTPICIPHREFIDIGRIASIE
NNHRPVDSAKKGQRVSIKIVGSNSEEKQKMFGRHFEIEDELVSKVSRRSIDILKANFRND
LSIEDWKLVKTLRDLFKIQ
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaagaagcctgtgcgtgaaaacgagagtcttgaatcttccaagcagggtggc
ggtggtggaggaaagtcgaagaagaaaaatcgggtgatagatgatgatgattactctgtt
gggacagaattgtctgaagatacagtggttctggaagacaaagctgagttagtgccagag
attagtaagaagagaggtaagaagggtaagaagtccggggctcgagatgaggacgttgaa
gaaacagaggacaaacttgttaggaaagaggaggatgatgagaaaaagaagttgggaggc
ggtgaaaagaatcttgctaagcaggttggtggaggagggaagtcaaagaagaagaatgtg
gccattgacgatgatgagtactctatcgggactgaaatatctgctgagacgcaagaggag
gaattagcaccagcagtggcgtttggcaagaaaaaaagtaaaaagggtaagaagggtggg
gtgagtacatctgattatggaagtcttggacaggatgatgacgatgaagacgtgtcaggt
ttgtcaagggatagggatggagtggttggtgatagtgaccgagaggctgaaagtgttgca
tccgttactggaaaaacgaagaacttaagactggggaagagcagtgcaagtttgtctgtt
acatctgtgtttcacgccattgatgatcaggataacgaaactgggcagctatctgaggaa
gatgaagagtccacagttgcctttactggtaggagtagtggcatttcttttagtgctgcc
cttcttgacgaagaaaatgatgcagatacctcacttaaattggagacagaggcaattgaa
gaagatgatgcaccaggaattattttttcaggtagaaagaagtcatctaagaaaaagaac
aaaagtgcatctagcacaatagacactgcattcagaaatgactcaaccaatgttgctgat
caagaccattgtagcctaggggttaatcgggaagatgctgatgataatagaggcaaaaag
cagacaacagatgtgttagaaacttcaaagaacaaaaccaagaaaaaaaagagtgggcat
gcttcaaagattctggcaggtcttggtgaagggtcaacaatcactactcctgctcaacct
gctcatgcttctcttccacaagaggagaaaagtcaacagcagtctcaattaggagatgat
acaggggaaagaagagcagttgaggaagctgtgaagtctgctgccgcaaagaagaagaaa
aagaaggagaaggagaaagagaaaaaggcagctgcagcagcagcagctgtctctgagatg
gaggaaaaacaggaaggaacaaagaatgataccagagcaaaattggcagataaaaagcag
tcgaagcaggttagggagatgcaagagagacttaaaaaaatgaaggaagctgaagaaagc
aagaagaaggaagaagaggaaagattaagaaaggaagaagaagaacaccttcgactggaa
gaactagaaagacttgcagaggagaaaaaacacttgaaaaaagagagggagaaggaaaag
ctcttgaagaagaaactagaagggaaattgcttactggaaagcaaaaggaagaagctcga
agattagaagcaatgagaaagcaatttcttgctagtggcggggctttgccactttatact
ggggagagtagaaaagatgcaactaaacgacctatttaccaatcaaagaaatcaaaggca
caagcttgggctaatggcaaagtccaggaagaatctgttgaaagcacagaagtgcaagaa
aatcagcaagaaattgtctctgaggttgattccatggaaactgagaaggctgagcatatc
gatttggtaagtgtagaggagaagtcagaagtacctgatgctgaagaaaacagagttgaa
gaagaggaagatgaggagtgggatgcgagaagttgggatgatgccgatcttaaattgcca
agaaagagtgcgtttgaagatgaagagctagattcagatccccaacctatcattacgaaa
gctgcaaggtccgttgtgagtgatacagggccactgcctgttgctgccaagtctgtaatt
cctactcaaaaagcagttgcaagtgtaccagatgtcactaagaatgatggaagtaagaag
agggagcctgtggttgtggtttcagggcaaggaacagaaaaacctggtgcttcttcaagc
aagagtgaagacaacctccggtctcctatttgctgtatcatggggcatgttgatactggt
aaaaccaagcttcttgactgcatacgaggcactaatgttcaagaaggtgaagctggaggg
attacacagcagataggtgcaacttattttccagctgagaatataagggagagaactaag
gaactaaaagctgatgccaagctgaaggtgcctggattgttggtcattgacacacctgga
catgaatcattcactaatttgcgttctcggggttcaggtttatgtgatattgcaatttta
gttgtggacattatgcatgggttagaaccgcagactatcgagtcacttaatcttctaaag
atgaggaatacggaatttattgttgctttgaacaagatagataggctttatggatggaaa
gtgtgccgcaatgcacctattgtgaaggcaatgaagcaacagtccaaagatgttcagttt
gaatttaataccaggcttactcagatcgtgacccagttcaaggagcagggtataaataca
gaattatactatagaaacaaagaaatggggaaggatacttttagcattataccaactagt
gcaatcagcggtgaaggtattcctgatttattgctattactggtccaatggactcaaaag
acaatggttgagagacttacctacagcagtgaagtccaatgtactgtgttggaggttaag
gctattgaaggtcatgggacaaccattgatgtggtattgatcaatggtatgctccatgaa
ggtgaccaaataatagtttgtggcatgcaggaccctattgtcacctcaatccgtgcgtta
ttgacgcctcacccaatgaaggaacttcgaataaagggatcatatgtgcatcataaagaa
atcaaggctgcacaggggataaagattaatgctcaggggcttgaacatgcaattgctggc
actagtttatatgttgtggggcctgatgatgatgtggagaacatcaaagaagcagctatg
gaagatatgaggtcggtgatgagcaggattgatagaagtggggagggagtttatgttcaa
gcttctacgcttggatcattggaagctttgctagagttcttgaagactgacgaagtaaga
atacctgtcagtggaattggcataggcactgtgcacaaaaaagatgtcatgaaagctagt
gtcatgcttgagaagaagaaagagtatgcaacaatcttggcctttgacgtgaaagtgaca
caagaagctcgagaacttgcagatgaggctggtgtcaaaatttttattgctgatattatt
tatcacctattcgatcagtttaaggcctatattgataatctcaaggaagaaaaaaagaag
gaagttgctgaagaagcagtctttccctgttctctcaagattgtacctaatcatgtgtac
aacaagaaggatccaattgttgtaggagttgatgttcttgagggcattgccagggtcggg
actccaatatgtattccacatagggaattcattgatattggtcggattgcgtccatcgag
aacaaccataggcctgttgactctgccaagaaaggtcagagggtgtccattaagatagtt
gggtctaactctgaggagaaacaaaagatgtttggcaggcattttgaaatcgaagatgag
cttgttagcaaagtctcgagaagatccattgacattctcaaggccaatttccggaatgac
ttgtctattgaagattggaagctagttaaaacattgagggacttattcaagatacagtga
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