Solanum stenotomum: 125874499
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Entry
125874499 CDS
T08385
Name
(RefSeq) protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sstn
Solanum stenotomum
Pathway
sstn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125874499
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sstn04040
]
125874499
Ion channels [BR:
sstn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125874499
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
125874499
NCBI-ProteinID:
XP_049411357
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Position
8:45774669..45779788
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AA seq
710 aa
AA seq
DB search
MAYGNSRSVRFQDDLEATKCAPAHEDSVITVKHKLDGVRQSEPASRKSDKKYDGGRKSLK
SKVLSRVFSEDYERVNKKILDPRGHVIRKWNKIFLVSCLVSLFVDPLLFYLPVVNQDICL
DIGVTLEIILTVIRSIADTFYVIQIFVRFRTAYVAPSSRVFGRGELVIDTSKIEQRYIRK
GLLIDVIAALPLPQVLIWAVIPNLRGSTMANTKNVLRFIIIFQYLPKLYLIFPLSSQIVK
ATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWMYVCNLEKPSCDYGYFD
CQSINDPQRKSWFNSSNITRQCDPNKSDYPFGIYGDTVTVSVTSALFFNKYFYCLWWGLK
NLSALGQDLSTSTHIGEISFAIIVATLGLVLFALLIGNMQTYLQSTTVRLEEWRIRRMDT
EQWMHHRQLPQELRQSVRKYDQYKWIATRGVDEEALIKGLPLDLRRDIKRHLCYDLVRRV
PLFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFF
NSCRIGPGDFCGEELLTWALNRRPSVILPSSTRTVKAVSEVESFALVAEDLKFVAAQFRR
LHSKQLRHKFRFYSHQWRTWAACFIQAAYRRYKKRKGVAELEALENLVNATESFSGQLDM
NAPSPRSGFAEYATRWAASRRGLHKHSDSDSSAVSSLQKPEEPDFSVDDE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcttatggtaattcgagatctgtaagattccaagatgatcttgaagcaacaaagtgt
gcaccagctcatgaagatagtgtgatcacggtgaagcataagctcgatggagtacgacaa
tcagagccagccagtagaaagagtgataagaagtatgacgggggtagaaaatccctgaaa
tctaaagtactatcacgagttttttcagaagactatgaaagagtgaacaaaaagatattg
gatcctcgaggacatgtaattcgtaaatggaacaagattttcttagtatcttgtttagtt
tcattgttcgtagacccactattgttttacttgccagtcgttaaccaagatatctgctta
gatataggagttactctggaaattatcctcacagttattagatcaatagctgataccttt
tacgtgattcagatttttgttcgatttagaactgcttatgttgctccatcttctcgtgta
tttgggagaggagagcttgttatagatacttcgaagatagaacaaagatatattagaaaa
ggtctcttgattgatgtcattgcggccctgcctttacctcaggtgttgatttgggctgtt
atccctaatttaaggggctcaacaatggcaaacacgaagaatgtcctaagattcattatc
atttttcagtatctccctaaactttatctcatatttccattgtcgtcgcaaattgtcaag
gctactggtgttgtgactgaaacagcatgggcaggagctgcttacaacttgatgctctac
atgttagcaagccatgtactgggagcttgttggtatcttctatcaattgagaggcaagaa
gcttgttggatgtacgtgtgcaatcttgagaagccatcttgtgattatggatattttgac
tgccagagtataaatgatccacaaaggaagtcctggttcaattccagcaacattacaaga
caatgtgacccaaataaaagtgattacccatttggtatttatggtgacacggtgacagtt
agcgtgacatctgctttgtttttcaacaagtacttctactgcctctggtggggcttgaag
aacctaagtgctctaggacaagatctttctacaagcactcatattggagaaataagtttt
gccatcatagttgcaacgctcggcctggttctttttgccttgctcatcggcaatatgcaa
acatacctccaatcgacaacagtcagattagaggagtggagaatcaggagaatggataca
gaacaatggatgcaccacaggcagttacctcaagaattaaggcagtcagtaaggaaatat
gatcaatacaaatggattgctacaagaggagttgatgaggaagctcttatcaaaggactt
cctctagatcttcgcagagatatcaaacgccacctctgctacgatttagttcgaagagta
ccactgtttgatcaaatggatgaaagaatgctagacgcaatatgtgagaggctaaagcct
gcattgtgcactcaaggcacttgtcttgtgcgcgagggtgatcctgtcaatgaaatgctc
ttcataattcgagggaatcttgattcttacaccacgaatggtggccgcactggtttcttc
aattcttgccgtataggtccaggtgatttctgtggggaggagctgctgacatgggctctc
aatcgacgtccaagtgtgattctaccatcctccactcgaacagtgaaagcagtttctgaa
gtagagtcattcgcacttgttgcagaggacttgaagtttgtggcagcacagtttcggagg
ctgcatagcaaacaactgaggcacaaattcaggttctattcgcaccagtggcgtacttgg
gctgcatgcttcattcaggctgcataccggagatataaaaaacgaaagggtgtagctgaa
cttgaggctctagagaatttggtgaatgcaacagagtcgtttagtgggcaattggatatg
aatgcaccatcacctagatcaggttttgcagaatatgcaacaagatgggcagcaagtaga
aggggtcttcacaagcactctgattcagattcctctgcagttagttcattacaaaagcca
gaagaacctgatttctctgttgatgatgagtaa
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