Solanum stenotomum: 125874572
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Entry
125874572 CDS
T08385
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125874572
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125874572
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Gene cluster
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125874572
NCBI-ProteinID:
XP_049411441
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Position
8:complement(7281428..7283469)
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AA seq
435 aa
AA seq
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MVTLKNRLSFFVILCTLVFSIEANIGEFDEVWRTRAIQANKNAKESYNPHPEKVADNLNK
HVHRSEEGSNSTRRDLHKYNGPCVATNPIDRCWRCDPHWAKNRQKLADCVLGFGHHTTGG
KGGKIYIVTDPGDNDMVNPKPGTLRHAVIQPGPLWIIFAHHMVIKLNQELIMTGDKTIDA
RGQQVHITGGASLMLQYINNVIIHGLHIHDIKSGSGGLIRDSINHYGFRTRSDGDGISIF
GSTNIWIDHVSMSNCDDGLIDAVQASTAITISNCHFTHHNDVMLFGASDSYKQDAILQIT
LAFNHFGQGLIQRMPRVRWGFVHAVNNDYTHWIMYAIGGSQHPTILSQGNRFIAPPNPNA
KEVTKRDYSPESVWKNWVWRSQGDLMMNGAFFVESGNRNHKFMTGPDMIHPRAGSDAGRL
TRFSGSLNCIEGKPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggtaactctcaaaaataggttgagtttctttgtaattttgtgcacactagtttttagc
attgaggctaatattggagagtttgatgaggtgtggaggactcgagccatccaagcaaat
aaaaatgctaaagaatcctataatcctcatcctgaaaaagttgcagataatttgaacaaa
catgttcacaggtcggaagaaggtagcaatagcacaagaagggacttgcacaagtacaat
ggtccatgtgtggctactaaccctattgatcgttgctggagatgtgacccacattgggct
aaaaatcgccagaagctagcagattgtgttcttggatttggccaccatacgactggtggt
aaaggtggcaaaatctacatagtaactgaccctggggacaacgatatggtgaatcctaag
ccagggacactgcgccatgcagtcattcagccagggccactatggatcatatttgcacat
cacatggtcattaagcttaaccaagaacttatcatgacaggcgacaagacaattgatgcc
agaggacaacaagtgcatattactggcggtgctagtttgatgttacagtacataaacaat
gtgattattcatggtcttcatatccatgatataaagtctggtagtggtggactaattaga
gactcgatcaatcattatggttttcgaacaagaagtgatggtgatggtatttcaatcttt
ggatcaacaaacatttggattgatcatgtttccatgtctaattgtgatgatggactcatt
gatgctgtgcaggcttcaactgctattaccatttccaactgccatttcacccaccataat
gacgttatgttgtttggggcaagtgacagctacaaacaggacgcaatcctacaaataaca
cttgcttttaatcactttggccaagggctgatccagaggatgccaagagtgagatgggga
tttgttcatgctgtcaacaatgactatactcactggataatgtatgccattggtggaagt
caacaccctaccatcctcagccagggcaaccgtttcatcgccccgcctaaccctaacgct
aaagaggtgaccaaaagggattattcacctgagagtgtgtggaagaattgggtgtggaga
tcacagggagatctgatgatgaacggagccttcttcgtggaatctggaaatcgcaatcat
aaattcatgacgggtcctgatatgatccaccccagggcaggatcagacgcgggcaggcta
acaagattttcaggctctttgaactgcattgaggggaagccttgttag
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