Solanum stenotomum: 125874740
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Entry
125874740 CDS
T08385
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125874740
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125874740
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125874740
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125874740
03041 Spliceosome [BR:
sstn03041
]
125874740
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125874740
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
125874740
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125874740
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125874740
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125874740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
125874740
NCBI-ProteinID:
XP_049411712
LinkDB
All DBs
Position
8:complement(41637277..41647043)
Genome browser
AA seq
304 aa
AA seq
DB search
MDPAAVDRIIEKLLEVRLSKPGKLVQLSESEIKQLCVSSRDTFVKQPNLLELEAPIKICG
DIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG
NHECASINRIYGFYDECKRRFNVKLWKSFTDCFNCLPVAALINEKILCMHGGLSPDLSSL
DQIRNLPRPTAIPDTGLLCDLLWSDPGKDVKGWGMNDRGVSYTFGPDKVSEFLSKHDLDL
VCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKN
KFMM
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgcagctgtcgataggattattgagaagctattagaagtccgattatcgaag
cctggcaagttggtgcagctttccgagtctgaaatcaagcaactatgtgtttcttctagg
gataccttcgttaaacaaccaaatctccttgaacttgaagcacccatcaaaatttgcggt
gacattcatgggcagtacagtgatctattgaggctttttgaatatggtggttttcctccg
aaggctaactacttatttttgggtgattatgtagatcgtgggaagcagagcttggaaaca
atatgcctcttgcttgcctataagattaagtatcctgagaactttttcttgcttagagga
aaccatgaatgtgcttctataaataggatatacggattctatgatgagtgtaagcgccgg
ttcaatgtgaaactatggaagtcctttacagactgttttaattgtcttcctgtagcagca
cttatcaatgagaagatattatgcatgcatgggggtctgtcccctgatctttctagtttg
gatcagattcggaacttaccacgtccaactgccatcccagacactggtttgctttgcgat
ttactttggtcggatcctggtaaagatgtaaaggggtggggcatgaatgataggggagtt
tcatacacctttggccctgataaagtttctgagtttttgtcaaagcatgacttggacctt
gtctgtcgtgcccatcaggtcgtggaggatggttatgaattctttgctgagaggcagctt
gtcaccattttttcagctcccaactactgcggagagtttgacaatgccggtgctatgatg
agtgttgatgaaaacttgatgtgctctttccaaattcttaagccagcagagaagaaaaat
aagtttatgatgtga
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