Solanum stenotomum: 125874777
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Entry
125874777 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125874777 isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125874777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125874777
03012 Translation factors [BR:
sstn03012
]
125874777
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125874777
Translation factors [BR:
sstn03012
]
Eukaryotic type
Release factors
125874777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
125874777
NCBI-ProteinID:
XP_049411755
LinkDB
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Position
8:complement(8274720..8287658)
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AA seq
535 aa
AA seq
DB search
MDIEEDIKALQLDSSAEDTVLVNVEDARPDEAIKHDKADGEDSLMEEERKTDDVEKPDML
EDELRDEAHPDLKPEHVEPKGVSGKESSPPEDMQVEVEVNKKRHLNVVFIGHVDAGKSTI
GGQILLLSGQVDDRTIQKYEKEAKDKNRESWYMAYIMDTNEEERVKGITVEVGRAHFETE
TTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTL
GVTKLIIVVNKMDDPTVNWSKERYDEIESKMVPFLRSSGYNVKKDVQFLPISGLFGSNLK
TRLEKSVCPWWSGHCLFEVLDAVEVPPRDPNGPLRMPIIDKFKDMGTVVMGKIESGSIRE
GDNLLIMPNKAAVKVLAIFCDEDRVRHVGPGENVRVRLSGVEEDDLLSGFVLCSVAKPIP
AVTEFVAQLQILELLDNAIFTAGYKAVLHVHAVVEECEIVELMQQIDLKTKKPMKKKPLF
VKNGAIVLCRVQVNNMICVEKFSNFAQLGRFTLRTEGKTVAVGKITALPTVADSA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaagaggacatcaaggcgctgcagcttgattcatctgcagaagatactgtg
ttggtcaacgtggaagacgctagacctgatgaagctataaaacatgataaagctgatgga
gaggatagtcttatggaagaagagaggaagactgatgatgttgaaaaacctgatatgctg
gaagatgagttgagagatgaagcacatccagacttaaagccagagcatgtcgagccaaag
ggtgtctctggaaaagaaagttcacccccagaagatatgcaggtggaggttgaagtcaat
aaaaagaggcacctgaatgtggtatttattggtcatgtggatgctggaaagtctactatt
ggaggacaaatactattacttagtggtcaagttgatgaccgtactatacaaaagtatgag
aaagaagcgaaggataaaaacagagagagctggtatatggcctatattatggatacaaat
gaagaagagagggtgaagggaataacagttgaagtaggaagagcacattttgaaacagag
acgacaagatttacaattcttgatgccccgggtcataagagctatgttcccaatatgatc
agtggagcatctcaagctgacataggtgtgctggttatatctgctagaaagggtgaattc
gaaactggatatgaaagaggtgggcagacacgcgaacatgttcaattggcaaagacccta
ggggttacaaagcttattattgttgtaaataagatggatgatccgactgtcaattggtct
aaagaaaggtatgatgagattgagtcaaaaatggttccgttcttgagatcatctgggtac
aatgtcaagaaagatgttcaattccttccaatctctgggctttttggttcaaatttgaaa
actagattggagaagagtgtatgcccatggtggagtggtcactgcctttttgaagtcctt
gatgcagtcgaagttccacctcgagatcctaatggtccattgagaatgcctattattgac
aaatttaaagacatgggaactgtcgttatgggtaaaattgagtctggaagcatacgtgag
ggtgataatctactgattatgccaaacaaggctgctgtaaaagttcttgccatattctgt
gacgaagaccgagtaaggcatgttggtcccggggaaaatgtgcgtgttaggttatctgga
gttgaggaagatgaccttttgtcaggctttgtcttgtgcagtgttgcaaagccaatacct
gcagttactgagtttgttgcacagttacagattcttgagctgttggacaatgctattttt
actgctggatacaaagctgtattgcatgtccatgcggttgttgaggaatgcgagattgtt
gaactgatgcagcagattgatctaaaaacgaagaaacctatgaagaaaaaacctctgttt
gttaagaatggcgctattgttttatgccgtgttcaggtgaataatatgatatgtgtagag
aaattctccaactttgcacaacttggacgattcactcttcgcactgaagggaaaactgtt
gctgtggggaaaattactgcactgcctactgttgctgatagtgcataa
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