Solanum stenotomum: 125874786
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Entry
125874786 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125874786
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125874786
Enzymes [BR:
sstn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125874786
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
125874786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_11
PhoH
Motif
Other DBs
NCBI-GeneID:
125874786
NCBI-ProteinID:
XP_049411769
LinkDB
All DBs
Position
8:complement(9834633..9839479)
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AA seq
922 aa
AA seq
DB search
MEERREFPAFPYEPYSIQLDFMNALYQSLNKGGVAMLESPTGTGKTLSIICSALQWLVDK
KQHQKTQMDSSSNLSGKQEDQLGVDDEPDWMRDFVINKDTKSPEKKTKEKKQMGFNKKID
RKGKRDNARDLITNGGGKDEDTDTEKVKNLLTKHEVEGMDEEEFLVEEYESEDENGGRVK
RKGGAVPVNSSSEEEKDEDNMEDEEDEARPKIYFCSRTHSQLSQFVKELRKTKFVDEVKV
VCLGSRKNFCINKDVLKLGSSTQINEKCLELQKSKKKEISKISKTKNIRACGRAGRSKTS
SGCPMLRNHKRGKEFRSEVSQQGPLDIEDLVQIGNDLKTCPYYGSRSMVHTADLVVLPYQ
SLLSKSSRESLGLSLKDSVLVIDEAHNLADSLVSMYNAKITLSQLELVHSHLESYFIHFR
NLLGPGNRRYIQIMMVLTRAFLQVLHNENCQSTFDPLCNAEGSESGFESSTAINEFLFAL
NIDNINLYKLLLYIKESNIMHKVCGYGHKLALSVEVSGLKNDNQSSHDESALSGFQALVN
MLLSLTNKDGDGRIIISMPRPRPKCSMQQGGYLKYVMLTGEKIFSEILNQAHAVILAGGT
LQPIEETKERLFPWLPPDQLHFFSCGHIIPSANILPIVVPQGPSGRSFDFSYSARSSSVM
IQELGLLVSNLVNVVPEGVVLFFSSFDYEGQVYDAWKESGIIGRIMKKKRIFREPRRSTD
VETVLKEYKETIDELSHRSSKRDPESRNGAILLAIVGGKVSEGINFSDGMGRCIVMVGLP
YPSPANIELMERIKHIEGFDTSSGKNTKFQAERSWYNGDAQAGLDILKSCRHRGKQYYEN
LCMKAVNQSIGRAIRHINDYAAILLVDKRYTYDPSERSSSHSTNKLPQWIKGRLVSGTKN
YGELQRLLHQFFKLHKGKEDNQ
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagaagggaatttccggcatttccgtacgaaccctattccattcagcttgat
ttcatgaacgccctttaccaatccctcaataaaggcggcgttgccatgctcgaaagcccc
actgggactggtaaaacgcttagtataatttgcagtgctcttcaatggctcgttgataaa
aagcaacatcagaaaacccagatggattcttcttcgaatttaagtgggaaacaggaagat
cagttgggggttgatgatgaaccagattggatgagggactttgtcattaataaagatacc
aaatcccctgagaagaagacgaaggaaaagaagcaaatggggttcaacaaaaaaattgat
aggaaaggaaaaagggacaatgcaagagatttaattactaatgggggtgggaaggatgaa
gatactgacactgaaaaggtaaagaatttactgacaaaacatgaggttgagggaatggat
gaagaggagtttttggttgaagagtatgagagtgaagatgaaaatggagggcgtgtgaaa
aggaagggtggtgcggtgccggttaattcctcgagtgaggaagaaaaagatgaagataac
atggaagatgaagaggatgaggctagacccaagatttacttctgtagccgaacacattca
caactttcacagtttgtaaaagagttaaggaagactaaatttgtggatgaagtaaaggtt
gtatgcttaggatctaggaagaatttctgcattaataaagatgtgttgaagttaggcagc
tccactcagataaatgagaaatgtttggaacttcaaaaaagtaagaagaaggaaatttct
aaaatatcaaagacaaagaacatcagagcttgtggcagagcgggaaggtccaagacttcc
tcaggatgcccaatgcttaggaatcacaaaagaggaaaagaattccgaagtgaggtttct
caacaagggcccttggatattgaggatcttgttcagattggaaatgacttaaaaacttgc
ccttactatggctcaagaagcatggtccacacagcagatcttgtggttcttccttatcaa
tcgcttctttcaaaatcatcgcgtgaatcacttggtttaagtttaaaagatagtgttctt
gtcatagatgaagctcataatttagctgattctctcgtcagcatgtacaacgcaaaaatt
acactgtcacagttggaacttgtgcattcgcacttggagagttacttcatacactttcgc
aatctgttagggccaggcaaccgaagatatattcaaataatgatggtccttactcgggct
tttctacaagttttgcataatgagaattgtcaaagcacctttgaccccctttgtaatgct
gagggaagtgaaagtggctttgagtcatccacggcgataaatgagtttctatttgccctc
aatattgacaacataaatctgtataagctcttgttgtatataaaagaaagcaatattatg
cacaaggtatgtggatatggacataaattagcactctcagtagaagtttcaggattgaaa
aatgacaatcaaagcagtcatgatgaaagtgcattatctggtttccaagcattagttaac
atgttattgtcactgacaaataaagatggtgatggaagaataataatatcaatgccaagg
ccaaggccaaaatgctcaatgcaacaaggagggtatttgaaatatgtcatgctcacagga
gaaaagatattttctgagatcttgaatcaagctcatgctgtcatattggctggtgggact
ttgcaacctatagaggaaacaaaagagcgcctgtttccttggttaccaccggatcagttg
catttcttttcctgtggtcatatcatcccatctgcaaacattctaccaattgttgttcct
caggggccttctggccgctcctttgattttagttacagcgccagaagctcatcagtcatg
atacaagaactagggcttttggtctccaatttggtaaacgtagttcctgaaggcgtggtt
cttttcttctcatcatttgactacgaaggccaggtctatgatgcatggaaggagtcgggc
atcattggaagaattatgaaaaagaagcgcatatttagagaacctagaagaagtacagat
gtggaaactgttttgaaggaatacaaggaaacaattgatgaactgtcccatagaagttct
aagcgggatcccgaatcaagaaatggtgcaattctccttgctattgtgggtgggaaagta
tcagaaggtatcaacttcagcgatggaatgggtcgatgcatagtcatggttggattgccc
tatcctagtcctgccaacatcgagttgatggagaggattaaacatattgaaggatttgat
acttctagtggtaagaacaccaaatttcaggctgaaaggagctggtataatggagatgct
caagctgggcttgacatcctaaaaagctgcaggcatagagggaagcagtattatgagaat
ctttgcatgaaagctgtgaatcaatcaattggtagagcaattcggcatattaacgactat
gctgccatcctattagttgataaacgctatacatatgatccttctgaaagaagctcctca
cactcaaccaacaagctcccccagtggattaaaggtcgtcttgtttctggaacaaagaat
tatggagaactccagaggctgctgcatcaattcttcaagctccacaaaggcaaagaggac
aaccagtaa
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