Solanum stenotomum: 125874919
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Entry
125874919 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125874919 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125874919
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
125874919
TFIIIC, fungi type
125874919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_2
TPR_8
TPR_6
TPR_1
TPR_17
TPR_16
TPR_11
TPR_15
TPR_CcmH_CycH
TPR_12
TPR_9
TPR_7
ANAPC3
TPR_20
DUF7017
SNAP
TPR_21
NatA_aux_su
HAT_PRP39_C
Suf
ARM_TT21_5th
DNA_polI_exo1
BTAD
TPR_GEMI5
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
125874919
NCBI-ProteinID:
XP_049411923
LinkDB
All DBs
Position
8:complement(11165469..11183189)
Genome browser
AA seq
953 aa
AA seq
DB search
MEEVKTLAEFDAFEHPMELELRDGEGGEEDNVGDNNSKEADDEDEDEDEEGEEEEEEEDG
SGEYKFQFGAEMDPLAFTEEDAFGRQPYQQFEHLEHQYEALAAKKRKAQALPPSEIPAKK
SRQEDRQEDGPGASYDEILEAMNYGMRRKSRKLKKRGRRKGSKSKVCSELKRKLGDATLH
YAHGRYEEAKLVLREVIRLSPNLPDPYHTLGLIYNAMGDKKRAMNFYMLAAHLSPKDASL
WNLLVAWSTEQGDRKQTRYCLSKAIKADPEDLSLRFHRASIYIELGDYQKAAEQYEQIAR
LRPNDIEVLKTAVQFYSKCGKHECSVGILEDYLKNHPTEADLSVIHLLAVIHMEDNAHLK
ALDLIEWAKQRYFTGKQMPLNLNIKAGICHLHLGHIEEAEIIFRAVQSENASQHPDIVTE
VADSLMTLEYYESALKYYMMIVGDDNKNKGYLHLRIAECYVFLRERVQAIEYFYKAVNEL
EDSVDARLTLSSILLEDGKDDEAVSVLSPPKESELCGSFPESSGDSSSGTPKSWWLSSKI
KLKLCQIYRAKGSLEACVDVIFPLIRETLFLKSVQPKVKVRRRLSKSVLNQRIKVVDDHQ
TDTIFHGFKPVALASDLSKAARAKKLLRKKEMLKEAKKAAALAAGADWKSDDSDSEFPEE
HVYREPPLPDLLKDEEHLCLIVDLCKALISLQRYWDALEIINLCLKLASSTLSVEKKGEL
QALGAQVGYNIADPIHGFDCARSIVGQHPYSFAAWNCYYKVISRLDNRHSKHSKFLSHMR
AKHKDCIPPIIIAGHQFTTISHHQDAAREYLEAYKLMPDNQLINLCVGSAIVNVALGFRL
LNKHQCVLQGMAFLHNNLRLSGNSQEALFNFGRACHHVGLVSEAAIYYQRVLDTHEDDCP
IPKLPNENLDPVENRKPGYCDLRREAAYNLHLIYKNSGAHDLARQILKDYCTV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtaaaaactttagcagagtttgatgccttcgaacacccaatggaattggaa
ttgcgagacggagaaggaggggaagaggacaacgtcggagataacaacagtaaagaggct
gatgacgaagacgaagatgaagacgaagagggggaggaagaagaagaagaagaagatgga
agcggagagtataaatttcaattcggagctgaaatggatcctttggcattcaccgaagag
gacgcctttggacgccagccataccagcagtttgagcacctcgaacaccaatatgaagct
ctcgctgccaaaaagcggaaagctcaagccctacctcctagtgagatcccagcaaagaaa
tctaggcaagaagaccgtcaagaagatggtccaggagcaagctatgatgaaatattggaa
gctatgaattatgggatgaggagaaaatcaaggaagctcaagaagagaggtcggcggaag
ggatcaaagagtaaagtttgttcagaattgaaaagaaaacttggtgatgccactcttcac
tatgcacatggccgttacgaagaggccaaacttgtgttgcgtgaagtcattcgtctttcg
ccaaaccttcctgatccataccatacacttggcctgatttacaatgctatgggtgataag
aagagagctatgaatttctacatgcttgcagcacatctgtcaccgaaggatgcatctcta
tggaatctcctggttgcttggtccacagagcagggagataggaaacagacccgctattgc
ctttccaaagcaataaaagcagaccctgaagaccttagtcttaggtttcacagggcttca
atatatattgaacttggagattatcaaaaagctgcagagcagtacgaacaaattgctcgt
ctacgccctaatgacattgaagtacttaagacagctgttcagttttacagcaaatgtggc
aaacatgagtgctctgttggtatcctcgaagactacctgaaaaatcatccaactgaagct
gatttaagtgtgatacatctgttagctgtgatacacatggaagacaatgcacatttaaaa
gctcttgatctaattgagtgggcaaagcagagatattttactgggaaacagatgcctctt
aatttaaatatcaaagctggaatatgtcatttacatcttggccatatagaggaggcagag
attattttccgtgctgtacaatctgaaaatgcatctcaacatcctgacatagtcactgag
gtcgcggactcccttatgacacttgaatactatgaatcagctttgaagtactatatgatg
attgttggagatgacaacaagaataaaggctatttgcacttgagaattgccgagtgttat
gtatttttgagggaaagagtacaagcaattgagtacttctataaagctgtaaatgaactt
gaggatagtgttgatgctcgattaactttatcatcgatcctccttgaagatggcaaagat
gatgaagcagtttctgtgctttcccctcccaaagaatcagagctctgtggttcatttcca
gaatcttcaggtgactcaagttctggtacaccaaaatcttggtggcttagtagcaagata
aagctgaagctttgccaaatttatagagctaaagggtcactagaggcttgtgttgatgtt
atttttcctttgattcgtgagacattgtttcttaagtctgtccaaccgaaggtcaaagtg
cggagaaggctatctaaaagtgttctaaatcaaagaatcaaggttgtggacgatcaccaa
acagataccatctttcatggctttaagcctgtagctttggcatctgatctgtcaaaagct
gcaagagcaaaaaaattgcttcggaagaaagaaatgttaaaggaagcaaaaaaagctgca
gctttggctgctggagctgactggaaaagtgacgattcggacagtgagtttcctgaggag
cacgtataccgagagcctccactaccagatcttctaaaagacgaggaacacctgtgcctt
attgtagatctctgcaaggctttaatatccttgcaaaggtattgggatgcacttgagatc
attaatctgtgtctaaaattggcatccagcacattgtctgttgagaaaaaaggggagctg
caagctttaggagctcaagtaggatataacattgctgatcccatccatgggtttgattgt
gcacgttccattgtcggtcagcatccttacagctttgcagcatggaattgctactacaaa
gtaatatcaagactagataatcgacattcgaaacatagcaagttcttgagccatatgcgt
gccaaacacaaagattgtataccaccaattattattgctggtcatcagtttaccacgatc
agccatcatcaagatgcggctagagagtatttagaagcttataagctgatgccagataat
cagttgataaatctctgtgtcggaagtgctatagtaaatgtagctcttggattcagactt
ctgaacaagcatcagtgtgtactacagggaatggctttcctgcataataatttgaggctt
tcaggaaacagtcaggaagcactgtttaattttggtcgagcttgtcatcatgttggtctt
gtttctgaagctgccatatattatcaaagggtacttgacactcacgaagacgattgtccc
atcccaaagcttcctaatgagaacctagatcccgtggaaaatagaaaaccaggttactgt
gatctacgcagagaagcagcatacaatctgcacttgatttacaaaaatagtggagcacat
gatctggcaagacagatactgaaagattactgtactgtatga
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