Solanum stenotomum: 125874966
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Entry
125874966 CDS
T08385
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sstn
Solanum stenotomum
Pathway
sstn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125874966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125874966
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
125874966
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
F-box-like
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
125874966
NCBI-ProteinID:
XP_049411969
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Position
8:complement(173310..176162)
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AA seq
581 aa
AA seq
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MSSSSFPEQVLKHLFSLLTSHKDRNSISLVSKSWYELERRSRRSVFIGNCYAVSPEIMIT
RFPQLTSIYLKGKPHFADFNLVPEGWGAYLQPWIAAMSPSYPWLEEIRLKRMVVTDDSLD
LISTSFHYFKVLVLLSCEGFTTDGLAAIAANCRNLTELDLGESELEDLSSDWLSHFPDGC
TSLVSLNISCLGSEISLSHLESLIARSPNLKTLRLSQAVPLEKLPHILSCASQLVEFGTG
AYSSEVQLQPDVFSNLQEAFSGCKILEGLSGFWDVMPAYLPAVYPVCSRLTSLNLSYATI
QNPHLNKLISLCHNLQRLWVLDYIEDTGLQALAVTCKDLQELRVFPSDPFDPEPNVSLTE
QGLVAVSDGCPKLQTVLYFCRQMTNAALITIARNSPNMVRFRLCILEPRTPDYLTLEPLD
AGFGEIVEQCKALRRLSLSGLLTDRVFEYIGTHAKKLEMLSVAFVGDSDMGLHHVLSGCE
SLRKLEIRDCPFGDNALLANAAKLETMRSLWMSSCSVSFGACKLLSQKMPRLNIEVIDET
GLLDTQPRSCPVDKLYIYRTVAGPRFDLPGFVRIMKEDAAH
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtcgtcattccctgaacaagtgttgaagcacctcttctccttgttaacctca
cacaaggaccgtaacagtatatccttagtctctaagtcgtggtacgagctcgagaggcgc
tctaggaggagtgtcttcatcggcaactgctacgccgttagccctgagattatgatcaca
cgcttccctcaactcacatctatctatctcaaaggaaagccccattttgccgactttaat
ctcgttcctgagggatggggtgcctatcttcaaccttggattgctgcaatgtctccctct
tatccttggcttgaggaaattagactcaagcgaatggttgtcactgatgactccttggac
ttgatttccacctcatttcattatttcaaggtcttggtcttgttgtcttgtgaaggcttt
actaccgatggacttgctgccattgccgctaactgcagaaatctcactgaactagacttg
ggagaaagtgaattggaggacctaagtagtgattggctcagtcattttcctgatggttgt
acgtcactggtgtcacttaacatttcttgtttgggttctgagatcagcttatcacatcta
gagagtctcattgcacgttctcctaatttgaagacacttcggctcagtcaagctgtcccc
cttgagaaacttccacacatattgtcttgtgcttcccaattggttgaatttggtacaggt
gcatactcttctgaggtacagttacagcctgatgttttctcaaacctccaagaagctttt
tcaggctgcaagatacttgaaggcttgtctggattttgggatgtcatgccagcttacctt
ccagctgtatatccagtttgctccagactcacctcattgaatttaagctatgctactatt
caaaaccctcatcttaacaagctcataagtctgtgtcataatttgcagagattgtgggta
ctagactacattgaagataccggtctccaggcgcttgccgttacctgtaaagacctgcaa
gaacttagggtgtttccttctgatccctttgatccagaaccaaatgtttccctgacagag
cagggacttgtagctgtttcagatggctgccctaagctccaaacagttctatacttctgc
cgccaaatgacaaatgccgctttgattactattgctagaaacagtcctaacatggttcgt
tttcgcttgtgtattttggaacctcgaactcctgattacttgactcttgaaccgcttgat
gctggttttggggaaattgtggaacaatgcaaagcgttgcggcgactttctctttctggc
cttcttactgaccgtgtgtttgagtacattgggacccatgctaaaaagttagagatgctt
tccgtcgcctttgttggggatagtgatatgggcctccaccatgtactctctggatgtgag
agcctcagaaaactagagatcagagactgcccctttggtgacaacgctcttttggctaat
gctgcaaaactggagacaatgagatccctttggatgtcttcttgttcagtaagttttgga
gcctgtaagctgctaagtcagaagatgcctaggcttaatattgaagttatagatgaaaca
ggtcttctggacacgcagccaagaagctgccctgttgataaactttacatataccgaaca
gtggctggaccaaggtttgacctgcctggttttgttcggataatgaaagaagatgctgca
cattag
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