Solanum stenotomum: 125875067
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Entry
125875067 CDS
T08385
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125875067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125875067
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sstn03037
]
125875067
Enzymes [BR:
sstn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125875067
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125875067
Chromatin remodeling factors
SRCAP complex
125875067
INO80 complex
125875067
INO80 complex (yeast)
125875067
SWR1 complex
125875067
ASTRA complex
125875067
Cilium and associated proteins [BR:
sstn03037
]
Motile cilia and associated proteins
Dynein assembly factors
125875067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_18
Mg_chelatase
AAA_25
bpMoxR
DnaB_C
TsaE
AAA_7
AAA_28
nSTAND3
IstB_IS21
AAA_11
NPHP3_N
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
125875067
NCBI-ProteinID:
XP_049412093
LinkDB
All DBs
Position
8:14090681..14095753
Genome browser
AA seq
455 aa
AA seq
DB search
MKIEEVQSTIKNQRIATHTHIKGLGLEPNGRPLPLAAGFVGQAAAREAAGLVVDMIREKK
MAGRALLLAGPPGTGKTALALGISQDLGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAI
GLRMKENKEVYEGEVTELSPEEGESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDAL
IKEKVAVGDVIYIESNSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTL
HDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYVDEGVAELVPGVLF
IDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICTVRGTDMTSPHGIPVDLLDRLVIV
RTETYGPAEMIQILAIRAQVEGLEIDEESLAYLGEIGQQASLRHAVQLLSPASIVAQMNG
RDKICKVDLDEVSSLYLDAKSSARLLQEQQDRYIS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaagaggtacaatcaacaataaagaatcagagaattgctactcatactcac
attaaaggccttggtcttgagcccaatgggagaccactaccattggcagctgggtttgta
ggtcaggcagcagcaagagaagctgcggggcttgtggtggatatgatacgcgaaaagaag
atggctggtcgggctttactgctagctggtccacctggtacggggaagacagctcttgct
cttggtatatcacaagaccttggaagcaaggttccattttgtccgatggttggatccgaa
gtgtattcatcagaagtgaagaaaactgaggtcttaatggaaaacttccggcgagctatt
ggtctccgtatgaaggaaaataaggaagtttatgaaggagaggtgactgaactatctcca
gaagagggtgagagtgtgacaggtggatatggtaaaagcattagccatgttataattggg
ttaaaaactgtcaaaggtaccaaacagttgaagcttgaccccacgatatatgatgcctta
attaaagagaaggtagctgttggtgatgtgatttatattgaatcgaacagtggagcagtt
aaaagagtgggcaggagtgatgcttttgccacagaatttgatcttgaggcagaagagtat
gttccacttcctaaaggagaggttcacaagaagaaggaaatagtccaggatgttacattg
catgatcttgatgctgcaaatgcacggccacaaggaggacaagatatattgtcccttatg
ggtcaaatgatgaaacctaggaaaaccgagatcactgacaagttgcggcaagagataaac
aaggttgtcaaccgttatgttgatgaaggtgttgcagagcttgttcctggtgtcttattt
atcgatgaggttcatatgcttgatatggaatgcttttcatacttgaatcgtgccttggag
agttcactgtctccaattgtgatttttgccactaacagaggcatttgtactgtcagagga
acagatatgactagtccacatggtattccagttgacttgttggatcgattggtgattgtc
agaactgaaacttatggtccagctgaaatgatacagatattagctatacgtgcacaggtg
gagggactagaaatagatgaagagagccttgcgtatttaggagagattggacaacaagct
tccttaaggcatgctgttcagctgctatccccagctagcatagttgcccaaatgaatggc
cgcgacaaaatctgcaaggtggatctagacgaagtgagttcgttgtacctggatgcaaag
tcttctgcaagacttcttcaggagcagcaagatagatacatctcatga
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