Solanum stenotomum: 125875465
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Entry
125875465 CDS
T08385
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Module
sstn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125875465
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125875465
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
125875465
NCBI-ProteinID:
XP_049412364
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All DBs
Position
9:44360685..44367101
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AA seq
441 aa
AA seq
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MKLVILLVLVIYCSLENATCNARSQESNIENFYVFNVLDYGAKGDGITYDTKAFEATWIE
ACKVEGSIMMVPSDYDFLVGPISFSGSHCEKNIVFQLDGRIIAPTNTKVWGVLQWLEFSK
LNGICVKGKGIIDGQGSVWWKIAPFLLIEEYESDYSEEQDDYAPKIALISSTSKGKMPRT
RPAALKFYGSSNVVVTGITIQNSPKAHLKFDNCVAVQVSGITVSSPGDSPNTDGIHLQNS
QNVVINSSHIACGDDCISIQTGSSAVFIHDVHCGPGHGFSIGGLGKDNTKACVSNITVQD
STLQNTMTGVRIKTWQGGSGSVQGIMFSNIHVSDVKIPIMIDQFYCDKRKCGNHTSAVTI
SGVSYQSIKGTYSYKPVHFACSDSVPCTGVSLADIELKPSSEKKHFYGPYCWETYGELRT
NTTPPIDCIQPDKRIPSYDSC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagttattttgctggttttagtaatctattgtagtttggagaatgcaacatgc
aatgctaggtcacaagaatcaaatattgagaatttttatgtctttaatgtcttagattat
ggtgctaaaggtgatggaatcacatatgacaccaaagcatttgaggcaacatggatagaa
gcttgcaaagttgaaggatcaattatgatggttccatcagactatgatttcctagttggt
cctatctctttttcagggtcacattgtgaaaaaaacattgttttccagttggatgggaga
attatagcaccaacaaacactaaagtgtggggtgtattacaatggcttgaattctcaaag
ctaaatggaatatgtgttaagggaaaaggcattattgatggccaaggatcagtctggtgg
aaaattgctccttttttgttaatagaagaatatgaaagtgattattcagaggagcaagat
gattatgctccaaaaattgctttgataagtagcacatcaaaaggaaaaatgcccagaacc
agaccagcagcactgaagttttatggaagttccaatgtagttgtaacaggcataacaatc
caaaacagtcccaaagcacatctcaagtttgataattgtgtggctgttcaagtttctggg
atcacagtttcatcccctggagatagcccaaatactgatggaattcaccttcagaactca
caaaatgttgttattaacagcagtcatattgcttgtggagatgactgtatatctatacaa
acaggaagttcagctgtgttcattcatgatgtgcattgtggacctggacatggattcagc
ataggagggctgggaaaagacaacacgaaagcctgcgtctctaacataacagttcaggat
tcaacactacagaacactatgactggtgtaagaatcaaaacatggcagggaggctcgggg
tcagttcagggaatcatgttctcaaatatccatgtttcagatgtgaaaataccaataatg
atagatcaattctattgtgacaaaagaaaatgtggtaaccacacatcagcagtaacaata
tcaggagtttcatatcaatccataaaaggaacttattcatataaaccagttcattttgca
tgtagcgactctgtgccatgcacaggtgtttcccttgcagacatagagcttaaaccttca
tcagaaaagaagcacttttatggaccgtattgttgggaaacttatggagaattgagaaca
aacacaacccctcctattgattgtattcaacctgataaaagaatccctagttatgattct
tgttga
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