Solanum stenotomum: 125875486
Help
Entry
125875486 CDS
T08385
Name
(RefSeq) multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sstn03016
]
125875486
Enzymes [BR:
sstn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
125875486
Transfer RNA biogenesis [BR:
sstn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125875486
Prokaryotic type
125875486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
125875486
NCBI-ProteinID:
XP_049412425
LinkDB
All DBs
Position
1:12700611..12715923
Genome browser
AA seq
726 aa
AA seq
DB search
MLKTLCSKLRRHHLLLTKTVLPNILKPYYYRFLEHTLLPATMKTMDESDVGISCYISNLP
GFRGILKQRYSDFIVNEVDLDENVVHLTSLEAPKECSENKAVNISDQLNRSYVTEIESFR
SLAGNSDADKLKAFIDELNSGADVSDESIVLSSSSDKSHRTAIHNFFKERLKFLVTDTVD
GVEDQSKCVRVRLNNDRNNGRGRSSRKRKDRDDKRYDSRGSDSWPGHLGKFLRFHLFKEN
KDTQEALNVIAKMLGVQLRSFGFAGTKDKRAVSIQRVTVFKQQASKLAALNKRLIGIKVG
DFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVALGKHGFINYFGLQRFGSSSV
PTHLIGAALLCGEWKAAVSLILDPREGEKNAISTVREYYKESGDIDGTLRQLPRYLVAEK
AILQCLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVVLGDLVY
SKEEYKVKESFVAECEDVKDNNMDDYSNMDEISETDLPEERNIPVKVINEEDLKSGTYTI
DDVLLPLPGSRVIYPSNDIGEVYRDLAQKDGISLTETAHKIKEFSITNMTGAYRRVFQKP
KDFEWELLSYTDGTIPLAETDFDVIAKSVKSKGREEDPTNGSKELPADSSAISVGGDMLS
GKMCEEKINNEAGMQSEKSQSGGNAEESQMALKLSFTLPASCYATMAVRELLKTSTSVAF
HKSLND
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaccctctgttctaaactgaggcgtcatcatctgctactaacaaaaaccgtt
ttgcctaacattcttaaaccctactactacagatttcttgaacacacccttttgcctgct
actatgaaaactatggatgaatctgatgtgggtatctcttgctacatttccaacctccct
ggctttcgtggcatcctcaagcagaggtactccgacttcattgtaaatgaggtggactta
gatgaaaatgttgttcatttgacttcgttggaggctccaaaggagtgttcagagaacaag
gctgtgaatatatctgaccaactgaatagaagttatgtgacagagatagaatctttcaga
tctctcgctggcaattctgatgctgacaagcttaaagcttttattgatgaacttaattct
ggggctgatgtcagtgatgaatccatcgtcctttcatcaagttcagataaatcccatcgg
actgcaattcataactttttcaaggaaagattaaaattccttgtaaccgatacagttgat
ggagtagaggaccaatcaaagtgtgttcgtgtgagattgaataacgacaggaataatgga
aggggtagatcctctaggaaaaggaaagaccgagatgataaacgttatgacagtagaggt
tcagacagttggccaggacatcttggcaagttcctcaggtttcatcttttcaaggagaat
aaggatacacaggaagctttaaacgttatcgcaaagatgcttggcgttcagcttaggtcc
tttggatttgctggtactaaagataagcgtgctgtttcaattcagagggtaactgttttc
aagcaacaagcaagtaaattagcagctctcaacaaaagattgattggtatcaaagttggt
gacttttgccatgttaaagaagggcttctgcttgggcagctttatgggaaccgatttact
ataacacttaggggagtgtcagcagagtctgaggatataattaaagcatcagcagttgcc
cttggaaaacatgggtttataaactattttggcttacagcggtttggcagcagttctgtg
ccaacacatctaattggagctgcattattgtgtggagaatggaaagctgctgtcagcttg
attcttgatccaagagaaggggagaagaatgccatcagtacagtaagggagtattacaag
gaaagtggtgacattgatgggactctaaggcagttacctcgttatctggttgctgaaaag
gcaattttgcagtgcctgaaaagatctcctggaaactatctacaagctctgaaggccata
cccaggactctccgaatgatgtatgttcatagctatcaaagttatctttggaaccatgcg
gcaagcatgagagtgcaaaagcatgggtttgaccaagttgtgttgggagatttggtgtat
tcaaaagaagagtataaagtgaaagaatcttttgttgctgaatgtgaagacgtgaaagac
aataatatggatgattatagcaatatggatgagatctcagagactgatcttcctgaagaa
agaaatataccagtcaaggttataaatgaagaagaccttaaatctggtacatataccatt
gatgacgtacttctacctttgcctgggtctagagttatttatccatcaaatgacattggt
gaagtttaccgtgacttagcacaaaaggatggtatcagcttgacagagactgcacataag
atcaaagaattctccataaccaatatgactggagcttacagacgtgtgtttcaaaagccg
aaggattttgaatgggaattgcttagttacactgatggaactatacctctggctgagaca
gattttgatgtcattgccaagtcagtgaaaagcaagggcagagaggaggacccgaccaat
ggaagcaaagagcttcctgctgactcttcagctatctctgtaggtggcgacatgctttct
ggaaaaatgtgtgaggaaaagattaacaatgaagcagggatgcaatcagagaaatctcag
agtggtggtaatgctgaggagagccagatggctctcaagctgagctttacactaccagct
tcttgctatgcaactatggctgtgagggagctgctgaaaacatccacttctgttgcattt
cacaagtcactaaatgattaa
DBGET
integrated database retrieval system
