Solanum stenotomum: 125875517
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Entry
125875517 CDS
T08385
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125875517
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125875517
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125875517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4_3
zf_RING_Vps8
zf-RING_16
FANCL_C
Prok-RING_1
Prok-RING_4
zf_RING_Vps8_fungal
zf-RING_4
zf-Nse
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
125875517
NCBI-ProteinID:
XP_049412456
LinkDB
All DBs
Position
9:complement(11366308..11367008)
Genome browser
AA seq
152 aa
AA seq
DB search
MGLSQYPTPADAGVLCVILVNTAISISIVKEMVRSILHVIGIHIASWDDYSIEGSLDSFE
CRRSPSESYMEEFRSHTPAIRYDSICISNHAEKECSVCLTDFEPDAEINHLSCGHVFHKH
CLEKWLKYWNVTCPLCRNYMMSQEGEEDTCPM
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgggcctctcacagtatccaactccagcggatgcaggagtgctctgtgttattctagtg
aacacagccatatccatctccattgtcaaggagatggtccgatcgatccttcatgtgatt
ggcatccatattgcatcatgggacgattattccatcgaaggctccttggactcgtttgaa
tgtcgcagaagcccatcagagtcatatatggaggaattcagaagccatacccctgcaatt
cgttatgattcaatctgtatctctaaccatgctgagaaagagtgctccgtctgcctgaca
gattttgagcctgatgcagagataaaccatctctcatgtggccatgttttccacaagcat
tgtttagagaagtggctcaagtactggaatgtaacttgtccactttgcaggaattacatg
atgtctcaagaaggcgaagaagatacttgtcctatgtga
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integrated database retrieval system
