Solanum stenotomum: 125875528
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Entry
125875528 CDS
T08385
Name
(RefSeq) two-component response regulator ORR24-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
sstn
Solanum stenotomum
Pathway
sstn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125875528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125875528
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
125875528
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
125875528
NCBI-ProteinID:
XP_049412468
LinkDB
All DBs
Position
9:complement(54345873..54352068)
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AA seq
681 aa
AA seq
DB search
MTVEEIRGNMGGGERGNNYDNFPIGMRVLAVDDDPICLKLLDGLLRKCQYQVTTTSQARM
ALKMLRENRDRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANSDTKLVRKGIDHG
ACDYLVKPVRIEELRNIWQHVIRKKKVEPKSQSKSNDQDKSYQVSGESGRGQSPTGNVDQ
NGKCNKKRKDEEDENDENGNDNEDPTTQKRARVVWSIELHRKFVAAVGQLGIEKAVPKRI
LDLMNVDGLTRENVASHLQKYRLYLKRINSVQTQQANMVAALGGRDYVRMGSLDGLGDFR
TLGGSGRYTHAALSSYSSGGMLGRLNSAAGLSVRNLAASQLLQPSHGQNLSNSVNAFTKL
NSNIPPASQNTSLFQGIPASLELDQLQQSKSSAHIPLDESRLLTADVLSCSNNSLSNVPN
NTMLLQGNPQQPLTGGGFGNQHSQNTTPFSSDSFNTCVNGSSNFLEHGRCNENWQNSVQL
SKFQSNSFPLTESFINSHLPQNSVREATTHLQNSPLDFTSTISVSPPFEDSRGEIQYRQS
MAGAVQSMNQTPSQAWADNKQHYSHNSNNTFGNNLRSQVPNDGNMASLSHSMNQSNENFG
RRMDMSLIGRSSGGSSTLVQQTEHEKLTPDSRTRSNEDYLLEPTKLQVGFSPQGYDSLDD
LMTAMKREQDGGMLDEGTIWI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggaagaaattagagggaatatgggtggtggtgaaaggggaaataattatgat
aattttcctattggtatgagagttcttgctgttgatgatgaccctatttgtttgaagctt
ttggatggtttgctcagaaaatgccagtatcaggtaactacaacaagtcaggcaaggatg
gcattgaagatgttgagggagaatagagatagatttgatttggtcatcagtgatgttcac
atgcctgatatggatggctttaaacttcttgaacttgttggtcttgagatggatcttcca
gtcataatgttgtctgcaaacagcgataccaaacttgtaaggaagggaatcgatcatggt
gcttgcgactatctggtgaaacctgttcgaattgaggagttgaggaacatatggcaacat
gtgatcagaaaaaagaaggttgagcctaagagccagagcaagtctaatgatcaagacaaa
tcttatcaggtaagtggagaaagtggtcgagggcaatcaccaacaggtaatgtagatcaa
aacggaaaatgtaacaagaaaaggaaggatgaagaagatgagaatgatgaaaatggaaat
gacaatgaagatccaacaactcagaagagagctcgtgtcgtttggtccatagaacttcac
aggaagtttgttgcagctgttggtcagttgggcatcgaaaaagctgtcccaaagaggatt
cttgacctgatgaatgttgacgggcttacaagggagaatgtggcaagccatctgcagaag
tataggctttacttgaaaaggatcaattcagttcaaacccaacaagcaaacatggttgcc
gcattagggggaagggactatgtgcgaatgggctcactggatgggcttggagattttcga
acattgggtggatcaggacggtatactcatgctgccttgtcatcgtacagttcagggggc
atgcttggcagactaaatagtgctgctggtctgagcgtgcgcaacctggcagcatctcag
ctactccaacctagtcatggtcaaaatttgagcaattccgttaatgcttttacaaaactg
aattcaaacattccgcctgctagccagaatactagtttatttcaaggcattcctgcatca
ttggagcttgatcaattgcagcagagtaagtcctcggcacatattcctttggacgagtcg
agactgcttacagctgatgtgctcagttgctcaaataactccttatccaatgttccaaat
aatacgatgttgcttcaagggaatccccagcaaccacttactgggggaggatttggaaat
cagcactctcaaaacacgactccgtttagctcagactcgttcaatacttgtgttaatgga
tcttccaactttctggaacatggtagatgtaatgagaactggcaaaattccgttcagcta
tcgaagttccagtctaattctttcccattgactgaatccttcattaacagccatttgcca
caaaatagtgtaagggaagcgacgactcatttacagaacagccctcttgattttacttcc
accatctcagtttctcctccttttgaagattcaaggggagaaatccaataccgtcaaagt
atggctggtgctgttcagagtatgaatcaaacaccatctcaagcatgggccgataataaa
caacattattcccacaattcaaataatacttttggcaacaacttaaggtctcaggttccc
aatgatggtaacatggcttctttaagccacagtatgaatcaaagcaatgagaactttggc
agaaggatggacatgtcattgattggtagatcgagtggaggttcttcgacactcgtgcag
caaaccgagcatgaaaagttgaccccagattcaaggacaaggtcaaatgaagactacctc
ttggagccaacaaagctacaagttggttttagtccacaaggctatgactccctggatgat
ctaatgactgcaatgaaacgggagcaagatggaggcatgttagatgaaggaacaatatgg
atttaa
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