KEGG   Solanum stenotomum: 125875557
Entry
125875557         CDS       T08385                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sstn  Solanum stenotomum
Pathway
sstn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125875557
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sstn03019]
    125875557
   03041 Spliceosome [BR:sstn03041]
    125875557
Messenger RNA biogenesis [BR:sstn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125875557
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125875557
Spliceosome [BR:sstn03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    125875557
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Spo7_2_N BRAP2
Other DBs
NCBI-GeneID: 125875557
NCBI-ProteinID: XP_049412496
LinkDB
Position
9:complement(11310772..11324386)
AA seq 347 aa
MGSRKNDFGDGASPGKIFIGGLAKETTREQFVKYFEKYGEIIDSVIMKDRQTGRPRGFGF
ITFADPTVVDTVIAENHIINDKQVEIKRTIPKGSADSKDFKTRKIFVGGIPTTMIEDEFK
NFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEEVVDNLLADGNRMDMMGTQVEIKKAE
PKKPSNPASAPAYGSNSRGRGYGDSYGGFADSYNSFDSGAFGPASYRSFGSRYGDYGYGG
RYGDFGSSEFGGYRGDPSLGYSSRFGSYAGGYGGGYSSSGLGAYGRGGGYGGAGPGAGYE
SGPGAGYESGPGAAYESGTGAGYGGSGGLYGSRGGYSGSGRYHPYSR
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgggttccaggaagaacgatttcggcgatggcgctagtcctggaaaaatctttattgga
ggtctagcgaaagagacaacgcgagaacaatttgtgaagtactttgagaagtatggggag
ataatagactcggtgattatgaaagataggcaaacaggtagacccagaggttttgggttc
atcacttttgctgatccaacagttgtagacactgttatagctgaaaaccatattatcaat
gacaaacaagttgagattaaaagaaccatcccaaaaggatctgctgattcaaaggatttt
aaaacaaggaagatttttgttggtggcattccaactaccatgattgaagatgaattcaag
aactttttctccaagtttgggaaagtaacagagtatgagatcatacgagatcacgtgtcc
aagcgttctagaggctttggatttattgtgtttgacaatgaagaagttgttgataatttg
ctggctgatggaaataggatggacatgatgggcactcaggttgagatcaagaaggcagaa
ccaaagaaaccctcaaacccagcttctgctcctgcatatggtagtaattctagggggcgt
ggatatggtgatagttatggaggatttgccgattcatataacagttttgacagtggagct
tttggccctgcttcctataggtcatttggatctaggtatggtgactatggatacggtggt
agatatggagactttggcagtagtgaatttggtggttaccgtggagacccctctcttggt
tattccagtcgttttggctcgtatgctggtggttatggtgggggatacagtagcagtggg
ctaggagcatatggccgtggaggtggttatgggggagctggccctggtgctggttatgaa
tctggccctggtgctggttatgaatctggccctggtgctgcttacgaatctggcactggt
gctggttatggtggatcaggaggtttatatggaagtaggggagggtatagtggcagtggc
cgttaccatccttactccaggtag

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