Solanum stenotomum: 125875593
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Entry
125875593 CDS
T08385
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
sstn
Solanum stenotomum
Pathway
sstn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125875593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125875593
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125875593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
125875593
NCBI-ProteinID:
XP_049412530
LinkDB
All DBs
Position
9:complement(50366314..50380207)
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AA seq
1481 aa
AA seq
DB search
MSGDNEIVMRDVTNAGLVVSDRIGRDVASQIDLEDALEASRYASHPYTAQPREWPPLVEV
VDSWELPSVLIERYNASSGEGTALCGVFPEIRRAWASVDNTLFLWRFDKWDGHCPEYSGD
EQAICVVGLAKVKPGIFVEAIQYLLILATPVELILVGVCCSASSDGTDPYAEVSLQPLPD
YTIPSDGVTMTCISSTDRGHIFLAGRDGHIYELQYSTGSGWQKRCRKLCLTAGLGSVISR
WVVPNVFKFGAVDPIVEMVIDNERHILYARTEEMKILMFSLGENGDGPLKKVAEERNLIN
QRDSYGGRQPAGSRAPRSAKTTIVSISPLSVLESKWLHLVAVLSDGRRMYLSTSSSGGNN
STAGSFGGLNHQKPNCLKVVTTRPAPPLGAGSGLPFGAVSLASRSQSEDLSLKIESAYYS
AGTLVLSDSSPSTVSSLLIVNRDSSSQSSSSSLGAGARSSRPLRELVSSLPIEGRMLFVA
DILPLPDTAAAVQSLYLQLEFGYDNSGESCERTSGKLWARSDLSTQHILPRRRIVIFSTM
GMMEVVFNRPVDVLRRLLESNSPRSLLEDFFSRFGSGESAAMCLMLAARIIYTETLVSNV
AAERAAEAYEDPRLVGVPQLEGSGAFSNTRAPAGGFSMGQVVQEAEPVFSGAHEGLCLCS
SRLLLPLWELPVFITKGSITSSDTFDNVVIVCRLPGETMQILEDKMRSLEKFLRSRRNQR
RGLYGCVAGLGDLTGSILIGTGSDMGAGDRSMVRNLFGSYARNVESNEGGSSNKRQRLPY
SSAELAAMEVRAMECIRQLLLRCGEALFLLQLLTQHHVTRLIQNFEANIKQALVQLTFHQ
LVCSEEGDRLATRLVSALMEHYTSPDGRGTVDDISGRLREGCPSYYKESDYKFYLAVESL
DRAAATLDAEERENLAREAFNYLSKVPESADLRTVCKRFEDLRFYEAVVLLPLQKAQALD
PAGDAFNEQIDAGIRDLALAQREQCYEIIFSALHSLKGEASKREFGSPIRPIAQSTLDQT
SRKKFIRQIVQLGVQSSDRIFHLKLYQTLIDLGLEDELLEYGGPDLVPFLQNSGREPTNE
VRVVSAVASPTSPLAHARLPAPSNQAKYFELLARYYVLKRQHVLAAHVLVRLAERRSTDA
GDAPTLEQRRQYLSNAVLQAKSAHDSDGMSGSARGALDNGLLDLLEGKLAVLQFQIKIKD
ELEAMSSRLESSTSTSESGSGETSPNMSNILREKAMELSMELKSITQLYNDYAVPFEIWE
ICLEMLYFASYSGDADSSILRETWARLIDQALMRGGIAEACAVLKRVGTHMYPGDGAVLP
FDTLCLHLEKAALEQVVSGAESVGDEDIPRALLAACKGAVEPVLNTYDQLLSSGAVLPTP
NLRLRLLRSVLALLREWALSVFAQGMGTSVTGASLILGGTLSLGQTAVVNQGVRDKITSA
ANRYMTEVRRLPLPQNQTEAVFRGFRELEESLLSPFPFERF
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggacaatgagattgtaatgcgtgatgttactaatgctggacttgtagttagt
gaccgcattggccgtgatgtagcttctcaaatcgatctggaagatgcattggaagcttct
agatatgccagtcatccttatactgctcaaccccgtgagtggcctcctttagtggaagtc
gtggactcttgggagttgccttctgtattgattgagagatataatgcatccagtggagaa
ggaactgcattatgtggagtatttcctgaaattcgcagagcttgggcatcagtggacaac
acattgtttctttggcggttcgataagtgggatggtcactgtcctgaatatagtggagat
gaacaagctatatgcgttgttggcctagccaaagtcaaacctggaatttttgtggaggcc
atccagtatcttctgatcttggcaactcctgttgagttgatccttgtaggtgtatgttgt
tctgcaagcagtgacggaactgatccatatgctgaggtgtcacttcagccattaccagat
tatacaattccatctgatggagtgaccatgacatgtatcagttccacagacagaggtcac
attttccttgcaggccgtgatggccacatatatgaattgcagtactcaactggttcgggg
tggcagaagcgatgccgcaagctctgtctaactgcaggtctcggaagtgtcatatcaagg
tgggtggtgccaaatgttttcaagtttggtgccgtagaccccattgttgaaatggtcatt
gataatgagagacacatcttatatgcacgtaccgaagagatgaaaattctaatgttttct
cttggagaaaatggggatgggccccttaaaaaagtagcagaagaaagaaatttgataaat
cagagggattcttatggtggtaggcaaccagctggttcaagggctcctagatcagccaaa
acaaccattgtttccatctcaccgttatccgtcttagaatcaaaatggctacaccttgtt
gctgtgctatcagatggcagaaggatgtatctttccacgtcttcttctggaggaaacaat
agtactgctggaagtttcggtggtcttaaccatcaaaagccaaactgcttaaaagttgta
acgactaggccagctcctcctctaggggcaggtagtgggcttccatttggagctgtatct
cttgctagtagatcacagagtgaagatctgtcactgaagatagaatcagcctattattct
gctgggactcttgtcctttctgattcatctccatcaactgtttcttctcttcttattgta
aatcgggattcaagttctcaatcttcttcaagtagcttgggagcaggtgctaggagttcc
cgcccactccgtgaattggtgtcatccctgcccattgaaggaaggatgcttttcgtggca
gatattctacccctaccagatacagcagccgcggtgcagtcactttatttacagctggag
ttcggctatgataactcaggggaatcctgtgaaagaacttcgggtaaactttgggctaga
agtgatctttcaacccaacatatattaccaagaaggagaatcgtcatattcagcactatg
ggtatgatggaagtagtttttaacagaccagtcgatgtactcaggagactattggaatcc
aattcacctaggtcattattagaggatttcttcagtcgttttggatctggagagtctgct
gccatgtgtttaatgcttgctgcgaggataatctatactgagaccttagtaagtaatgtt
gctgctgagagggcagctgaagcatatgaggatccaagacttgttggagtaccacagcta
gaaggtagtggtgcattttcaaatactagagctccggctggaggatttagcatgggccag
gttgtgcaggaagctgagcctgttttctctggtgctcatgaaggtctttgcttatgctca
tcaaggttacttctacctttgtgggagcttcctgttttcatcacgaaaggaagcataact
tcttcagacacatttgacaatgtagtaattgtctgccgacttcctggtgagacgatgcaa
atcctggaagacaagatgcgttctttagagaagttcctgagatctaggaggaatcagaga
aggggactttatggttgtgttgctggcctaggtgacttgacaggctcaattttgattgga
actggctcggatatgggggctggtgacagaagtatggtaagaaatctatttggatcttat
gctcgcaatgttgagtccaatgaaggtggatcttcaaacaaaaggcaacgacttccttat
agttctgcagagcttgctgccatggaggttagagcaatggagtgtatcaggcaattgctc
cttagatgtggcgaagccctatttttgctgcaacttcttacacaacatcatgtgacacgg
ttgattcagaattttgaagctaatatcaagcaggccctagttcagttgacattccatcaa
ctagtttgttcagaagagggagatagacttgctacgagacttgtatctgccctcatggag
cattacactagtccagatggcaggggaactgttgacgacataagtggtagactacgagag
ggttgcccaagttattacaaagaatctgattacaagttctacttagcagttgaatctctt
gatagagctgctgctacattagatgcagaggagagagaaaaccttgcgagagaggcattc
aactacctaagcaaagttccagagtctgcagatctgcggactgtatgtaaacgttttgaa
gatctgagattttatgaagctgtggtcctattacctctgcaaaaggcacaagctcttgac
cctgctggtgatgcttttaatgagcaaatagatgctggaattcgagatcttgcacttgct
caacgtgagcagtgctatgagattattttcagcgccttgcattctttaaaaggtgaagct
tcaaagagggaatttggatctcctatcagacctattgctcaatctactcttgatcaaact
tctcggaaaaagtttatacgccagattgtccaacttggtgtgcaatcttcagacagaatt
tttcatctgaagctgtatcaaaccttaattgatttgggcctggaagatgaactactggaa
tatggtggccccgatttggtaccttttctgcaaaattctggtcgtgaacctacaaatgag
gttcgtgttgtctctgcagtggcatctccaacttcaccattggctcatgctagattacct
gcaccatccaaccaagcaaaatattttgagcttttggctcgttattatgttttgaagaga
cagcacgttcttgcagcccatgttttggtgaggctggcagaaaggcgctccactgatgca
ggggatgctcctactttagaacaaaggcggcaatacttgagtaatgctgttttgcaagca
aagagtgcccatgatagcgatggtatgagtggttctgcccggggtgctcttgacaatggg
ctgcttgatttgctcgaaggaaagcttgctgttcttcagtttcaaattaaaattaaagat
gaactggaggctatgtcttccaggttagagtcatctacaagcacatctgaatctggttct
ggtgaaacatcacccaatatgagtaatattcttcgagaaaaagccatggagttatcgatg
gaattgaagagcattacacagttgtataatgactatgctgttccttttgagatatgggag
atatgtctggagatgttgtactttgctagctactctggtgatgctgatagcagcatacta
cgagagacatgggctaggctcattgatcaagctcttatgaggggtgggattgctgaagct
tgtgctgtactgaagagggttggtacccatatgtatcctggagatggagctgttttacca
tttgatactctctgtcttcaccttgagaaggctgcactggagcaagtggtttctggtgct
gaatctgttggagatgaagatattcctagggctcttttagctgcttgcaagggtgcagta
gagcctgtattaaatacttatgaccagctgttatccagtggggcagtgttgccaactccg
aatcttagattgcgtctcctgcgttccgtactggctttacttcgtgaatgggcactttct
gtcttcgcacagggaatgggtacaagtgttactggagcctctctgattctcggtggaact
ttatcattaggacagactgcagttgttaatcaaggtgttcgcgataaaataacaagtgca
gcaaatcgatacatgacagaagtgcgaagattacctcttccacaaaatcagactgaagct
gtctttcgaggttttcgtgaacttgaagaatcattgttgagtccattcccttttgaacgg
ttttga
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