Solanum stenotomum: 125875604
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Entry
125875604 CDS
T08385
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125875604
Membrane trafficking [BR:
sstn04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
125875604
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_12
TPR_1
TPR_2
bL31_N
Motif
Other DBs
NCBI-GeneID:
125875604
NCBI-ProteinID:
XP_049412545
LinkDB
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Position
9:complement(242850..261389)
Genome browser
AA seq
1254 aa
AA seq
DB search
MANFLAQFQSIKTTCDHVVIAVEDVSDLWPLVKKGFEDHLPFKRAFLNNKTRNPVLVDEL
PAEYILTTDSRLRSRFPQEQSLFWFREPYATVVLVSCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSKAAAHNDQSTKMAKKVYAKLEVDFSSKKRERCCKLDFHGPDTNFWDDLEAKI
MECIRNTLDRRIQFYEEEIRKLSEQRFMPVWNFCNFFILKESLAFMFEIAHLHEDALREY
DELELCYLETVNMTGKQRDFGGMDSGDDQAALLNPGKKALNQIVQDDSFREFDFRQYLFA
CQSKLLFKLTRPFEVASRGHSFIISFSKALALHESKLPFCTREVWVITASLALISATAAQ
YKDGEVASDIEKEFYRVQGDLYSLCRTKFMRLAYLIGYGLHIERSPVNSASLSMLPWPKP
GVWPSLPPDASSEVLVKEKMMFEESLQVKHFGIQRKPLPLEPSVLLREANRRRASISAGN
VFEMFDGHPNAIDGSGSMSSPAKSQSISMSRTNSSPGNFESSISRPLRLSEICVAAEHAL
RNTISDAELWKSLSSVQEFEQKYMELSKGAANNYHRSWWKRHGVVLDGEIAAVFHKNGNY
DLAAKLYEKVCALYSGEGWQNLLAEVLPNLAECQKELGDQAGYLSSCVRLLSLDKGLFSS
KERQAFQSEVVRLAHSEMENTVPLDVSSLITFSGNPGPPLQLCDGDPGTLSVIVWSGFPD
DITLESLSLTLTATTNTDEGVKAIKRSGETILKPGRNTIMINLPPQRPGSYVLGVLTGKI
GLLSFRSHSFSKGAPADSDDFMSYEKPTRPILKVFKPRSLVDLTAAVSSALLMNEPQWVG
IIVKPISYSLKGAILHIDTGPGLTIEKSHHIEIERHMNGHTDELDHSEGSKDDDSSAATP
EVKQMSLHDGNIELPGWASNITSVLWIPVRATSDELPKGAPAGAVVPQRQNLVEGLRTIA
LKLEFGVSRNQIFERTIAVHFTDPFSVSTRVTDKSTDGKLLLQVILQSQVQATLTIYDSW
LDLQEGFAHTRNGDKKPISGFFPLVISPKSRAGILFSVCLARAPIGEEAEIQCPESILNI
RFGIWGNRAAGAHDPNAEEPSGHDGSTQSLIFKSSLLLQRPVLDPCFAVGFLPLSSTDLQ
VGQLVSMRWRVERLKSLEENAASENNDDVLYEVHANSDHWMIAGRKRGHVLLSTEQGSRI
TISVLCLPLVAGYVRPPQLGLPNVDKANICCNPPSPHLVCVFPPALSSSFCIPP
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttcttagctcagtttcaaagtattaaaactacttgcgatcacgtcgtcatt
gccgttgaagatgtcagtgatttatggccccttgtaaagaaggggtttgaagaccatttg
ccattcaagagagcttttctcaataacaaaacccgcaatcctgtgcttgtggatgaattg
ccagctgaatacatattgaccacagattcaagacttcgtagtcgatttcctcaagagcaa
tcattattttggttccgagagccatacgctaccgtggttcttgtctcatgtgaggatctt
gatgagttcaaaactattctcaagccacgcctaaagttaatagttcaaaatgatgaacgg
gagtggttcatcgtgttcgtgtctaaagcagcagctcacaatgatcagtccaccaagatg
gcaaaaaaagtatatgctaaacttgaagttgattttagctccaagaagagagaaagatgt
tgcaaactagactttcatggacctgatacaaatttctgggatgacttggaagccaagatc
atggaatgcatcagaaatacacttgataggcgcattcagttttatgaagaagaaatacgg
aagctcagtgaacagcgcttcatgcctgtgtggaacttctgtaactttttcattttgaag
gagagtctggcttttatgtttgagattgctcatctccatgaagatgcattacgtgaatat
gatgagctagaactctgctacttggaaacagtgaatatgactgggaaacagagggacttt
ggaggaatggacagcggcgatgatcaggctgcattgctcaacccaggaaaaaaagcactt
aaccagattgttcaagatgattcttttagggaatttgacttcaggcagtatctatttgcc
tgccaatcaaagcttctctttaagctgacccgaccatttgaagtagcatcaagggggcat
tcatttattattagcttctcaaaggcattggcccttcatgagagtaaattgcccttctgc
acgcgtgaagtatgggttataactgcttccttggctttaatctctgcaactgctgctcaa
tacaaagatggagaagtggcttctgacattgaaaaagagttttaccgtgttcagggggac
ctttattctttatgtcgtactaagttcatgcggctggcatatttaattggttatggatta
catattgaaagaagtcccgtgaacagtgcttcacttagcatgctgccttggcctaagcca
ggagtttggccttctcttcctcccgatgcttcatcagaggtgcttgtgaaagaaaagatg
atgtttgaagaaagtctgcaggttaagcattttggtattcagaggaagcctttgcctcta
gaaccatctgtacttttgcgagaagcaaatcgcagaagagcttctatttctgctgggaat
gtgtttgaaatgtttgatggacatccaaatgcaattgatggctcaggttcaatgtcttca
ccagcaaaatcacagtcgatatcaatgtcaagaactaactcttctcctggaaactttgag
agctcaatcagccgacctttgaggctttcagaaatttgcgttgctgctgagcatgctttg
cggaatacaatttctgatgcagaactgtggaaatcgttgtcttctgtccaggaatttgag
caaaaatacatggagctgtcaaaaggagctgccaacaactatcatcgttcatggtggaag
aggcatggagttgtacttgatggtgaaattgcagctgtgttccataaaaacggaaattat
gatcttgctgcaaaattgtatgaaaaggtttgtgctctttattctggtgaaggatggcag
aatcttttagctgaggtccttcccaatttagctgaatgccaaaaggaacttggtgatcaa
gctggctatctatcttcatgtgtaagattgctctcattggataaaggattgttctcaagc
aaggaacgtcaagcatttcagtctgaagttgttcgtcttgctcatagtgagatggagaac
accgtgcctctagatgtgtcctcactgataacattttctggcaatcctggaccaccactg
cagctttgtgatggcgatcctggtacactctccgtcattgtatggagtggatttcctgat
gacattactctagaatcacttagtctaactctcacagccacaactaataccgatgagggt
gttaaggcaataaaaagatccggtgagacgatattaaagcctggaaggaatacaatcatg
atcaatttacctccgcagagacccggttcttatgttttgggggttcttacagggaaaatt
ggtttactaagttttagatctcacagcttttcaaagggtgctcctgcagatagtgatgat
tttatgagttatgagaagccaacaaggccaatcttaaaggtgttcaagccaaggtctctg
gttgatcttactgctgctgtttcatctgctttattgatgaatgaacctcagtgggttgga
ataattgtgaagccaattagttactctcttaaaggtgcaattctgcacatagacactggt
cctgggttgactattgaaaaatcgcatcatattgaaattgagaggcacatgaatgggcac
acagatgaattagaccattctgaaggttctaaagatgatgacagttctgcagctactccc
gaagttaaacaaatgtctcttcatgatggaaatattgagctgcctggttgggcaagcaac
ataacttctgttttgtggattcctgtgcgtgctaccagtgatgaacttcctaaaggcgct
cctgcaggtgcagttgttccccagagacagaacctagtggagggactgagaacaatagct
ttaaaacttgaatttggagtttcgcggaaccaaatatttgaaaggacaattgctgtgcac
ttcactgaccccttctctgtaagtacacgagttacggacaaaagcactgatggaaaattg
cttttgcaggtgatcctgcaatcacaagtccaagctacattgaccatctatgactcttgg
cttgatcttcaagaaggttttgcccacactagaaatggtgataaaaagccaatctctggc
ttcttccccttagtgatctctccgaaatctagagctggaattctcttcagtgtatgcctg
gcaagggcaccaataggagaagaagctgagatccagtgtcctgagagcattttaaatatt
agatttggtatttggggaaatagagctgctggtgcccatgaccccaatgctgaggaacct
agtggacatgatggatcgactcagagtctgattttcaagagctctcttcttttacagaga
cctgtgcttgacccttgctttgccgtcggttttctacctctttcttcaactgatcttcaa
gtaggacagcttgttagcatgagatggagagttgaaaggttaaagagtttggaggaaaat
gcagcttctgaaaacaatgatgatgttctatacgaggtccatgcaaattcagatcactgg
atgattgctgggaggaaaaggggacatgtcttactctctacggaacaaggatcgagaata
actatttcagtattatgcttgccactggttgctggatatgttcgtcctcctcaattgggg
ttgccaaatgttgataaggcgaatatttgttgcaatcctcctagtccacatttggtgtgc
gtcttccctccagctttaagttcttctttctgcataccaccctga
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