Solanum stenotomum: 125875642
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Entry
125875642 CDS
T08385
Name
(RefSeq) auxin response factor 6-like isoform X1
KO
K14486
auxin response factor
Organism
sstn
Solanum stenotomum
Pathway
sstn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125875642
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
TFIIA
Motif
Other DBs
NCBI-GeneID:
125875642
NCBI-ProteinID:
XP_049412599
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Position
9:12176584..12184875
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AA seq
893 aa
AA seq
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MRVSSSGFNPQQEEAAGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN
KEVDAHIPNYPGLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELG
IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEW
KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPS
SVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMR
FRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIE
PLTTFPMYPSPFSLRLKRPWPSGLPSLPGFPNGDMTMNSPLSWLRGDMGDQGMQSLNFQG
FGVTPFMQPRMDASMLGLQPDILQTMAALDPSKLANQSLMQFQHSIPNSSAPLCQSQMLQ
PSHSQQNLIQGFSENHLISQAQMLQQQLQRRQNFNDQQQLLQPQLQQHQEVSSQFQHQQQ
TKTISGLSQMASATHPHLSHLQVLSSTGSPQTFSDILGNHVNASSNSNMQSLLSSFSRDG
ASTVLNMHETHPLVSSSSSSKRIALESQLPSRVTPFVVSQPEDVIAHNTKVSDLSSLLPP
FPGRESFSDYRGVEDSQSNALYGFTDSLNILQTGMSNMKGSSGDNGSLSIPYATSTFTST
VGNEYPLNSDMTASSCVDESGFLQSSENGDQANPTNRIFVKVQKSGSFGRSLDISKFSSY
HELRSELARMFGLEGLLEDPERSGWQLVIVDRENDILLLGDDPWQEFVNNVWYIKILSPH
EVQQMGKEGLDLPNGVQVQTQTLPGNANGCDDYMNQKGSRNTMNGIPLGSLDY
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagggtatcatcatctgggttcaatcctcagcaagaagaagcagcaggggagaagaaa
tgcttgaattcagagctgtggcacgcgtgtgcaggacccctagtttcgcttccacctgta
ggaagcagagttgtgtattttcctcaagggcatagtgagcaggttgctgcctcaaccaac
aaggaagtagatgctcatatccctaattatcctggtttaccgcctcaactaatttgtcag
cttcacaacctgacaatgcatgcagatgttgagactgatgaagtatatgctcaaatgaca
ttgcagccactaagtccacaagaacaaaaggacgtgtgcctgctaccagcagaacttggc
atcccgagtaaacaaccaaccaactatttctgcaaaactttgacggcaagtgacaccagt
actcatggtggattctctgtccctcgccgagcagcagaaaaagttttcccccctcttgat
tactctcagcagccaccctgtcaagagttgattgcaaaagatctccatgggaatgaatgg
aaattccggcatatttttcgcggacaaccgaagaggcatctattgacaaccggatggagt
gtgtttgtgagtgcaaagagacttgttgcaggagatgcagtcatctttatctggaacgaa
aacaatcaattgcttttggggattcgacgggctaatcgtcctcaaactgtcatgccttct
tcagtcttgtcaagtgatagcatgcacattggtctcctagctgcagcggctcatgcagct
gcaactaatagccgctttacaatattttataatccaagggccagcccatcagagtttgtc
atacctctggccaagtatgctaaagcagtgtatcatactcgaatatctgttggtatgagg
ttccggatgctgtttgaaacagaagaatcaagtgtccgtaggtacatgggaacaattact
ggcatcagtgatttagatcctgttcgttggccaaattcacactggcggtctgtgaaggtt
ggatgggatgaatcaactgctggagagaggcagcccagagtttctctgtgggaaattgaa
cctctgacaacatttcctatgtatccttctcctttctcccttaggctaaagcggccttgg
ccatctggactaccttctctccctggtttcccaaatggtgatatgactatgaattctcca
ctctcatggctgcgtggtgacatgggagatcaagggatgcagtcgcttaatttccaggga
tttggtgttactccgtttatgcaaccaagaatggatgcttctatgttaggtttgcaacct
gacattctgcaaacaatggcagcactagatccatcgaaacttgcaaatcaatcccttatg
cagttccaacatagtattcctaacagttcagcgcctttgtgtcagagtcagatgttgcag
ccttctcattcacagcaaaatctgatccaaggcttttcagaaaaccacttaatatctcag
gcgcagatgcttcagcagcaattgcagcgccgtcaaaattttaatgatcaacagcaattg
ctgcagccacagcttcagcagcaccaagaagtgagctcgcagtttcaacatcaacagcaa
actaagaccatctccggtctctctcagatggcttcagccacgcatccccatctttctcat
ttgcaagtcctaagttcaactggttccccgcaaaccttttctgatatactgggtaaccat
gtcaatgcatctagtaattctaatatgcaaagtctgttgagttcattttcccgtgatgga
gcatctactgtcctgaacatgcatgaaactcaccctctagtgtcttcgtcctcatcatca
aagcgaattgctctagaatctcagctcccttctcgggttactccatttgtggtgtcccag
cctgaggatgtgatagcgcacaatactaaggtctcagatctttcctctttgctgccacct
tttcctggcagagaatcgttttctgattatagaggagtagaagatagccaaagcaatgca
ctctatggatttacagactctttgaacatactgcagaccggtatgtccaacatgaagggt
agtagtggtgataatggatctttatctattccttatgctacctctaccttcacaagtact
gtgggcaatgagtatccccttaactcagacatgacagcttcaagttgtgtagatgaatca
ggtttcttgcagtcctccgaaaatggggaccaagcaaacccaactaatagaatctttgtg
aaggttcaaaaatcagggtcctttggacggtcactcgatatctccaaatttagcagctat
cacgaacttcgaagtgagcttgctcgcatgtttgggctagaaggcttgttggaggaccct
gagagatcaggctggcagcttgtaattgttgaccgagagaatgatatcctcctcctcggt
gacgatccttggcaggagtttgtgaacaatgtttggtacatcaagatactttctccacat
gaagtgcagcagatggggaaagagggacttgatcttccaaatggcgtccaagtgcagaca
cagacgcttcctggcaatgccaatggatgtgatgactatatgaaccagaagggctcccga
aatactatgaacgggataccgttggggtcacttgactactaa
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