Solanum stenotomum: 125875705
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Entry
125875705 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125875705
KO
K24260
WD repeat-containing protein 11
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125875705
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sstn03037
]
125875705
Membrane trafficking [BR:
sstn04131
]
Endosome - Lysosome transport
Others
Others
125875705
Cilium and associated proteins [BR:
sstn03037
]
Other cilia and associated proteins
Other cilium assembly proteins
125875705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
Beta-prop_WDR11_1st
TPR_WDR11
WD40_CDC20-Fz
TPR_GEMI5
Beta-prop_RIG_1st
ELYS
Motif
Other DBs
NCBI-GeneID:
125875705
NCBI-ProteinID:
XP_049412680
LinkDB
All DBs
Position
9:50514324..50538329
Genome browser
AA seq
1314 aa
AA seq
DB search
MSIQIQKPPNESWDCMLPGPPSRSNGGSADISPAGLFAYASGSSVSVVETHSMQLVTTIP
LPPPSSSTTSLSPFITSVRWSPQTLPHLIDVPQHHLLLAVGDRQGRICLLDFRSKSPTIF
FDTGSGSKLGIQDLCWVQTGPDSWILAALCGPSLLSLFNTSTGRCFFKYDAAPEYFSCLR
RDPFDSRHFCALGLKGFLLSVTALGDTENDVVLKELQIRTDTTELQKLERDSSTGGNGAP
ASATFPTYISKFAFSPHWMHLIFVAFPRELVVFDLQYETALFSSGLPRGCGKFLELLPDS
NIEVLYCAHLDGKLSTWRRKDGEQVHTMCVMEELMPSIGTAVPSPSILAAVVSHSDAAFQ
TIGKLYSDAHHSVDVDFDNPFDFCDESLVLSKTRLITISDDGKVWKWLLTAEGSVDIQKD
VTNPDIVAEACKSVPSEIPMGHNSEISTVPLSTDANRSRTCLSKSTTSLDEVSFKISLVG
QLHLLSSAVTMLAVPSPSLTATLGRGGNSPAVAVPLVAVGTQSGTIDVIDVSANAVSVSF
AVHNSVVRGLRWLGNSRLVSFSYSQGTEKAGGYINRLVVTCLRSGLNRPFRVLQKPERAP
IRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRPLPKDRP
AVASTETSSPTKEAVAAADAKGAGTDGSQDEFSESFSFALVNGALGVFEVHGRRIRDFRP
KWPSSSFVSSEGLVTAMAYRLPHVVMGDRSGNIRWWDVTTGQSSSFNTHREGIRRIKFSP
VVPGDRSRGRIAVLFYDNTFSVFDLDSPDPLANSVLQPQFPGTLVLELDWLPLRSDKNDP
LVLCIAGADSSFRLVEVNMSDNKMVHGPQARPVKERFRPVPLCSPILLPTPHALALRTIL
QLGVKPSWFNTWSTTTDDANHQVPGTPTSGDLRNHMIESPRIGDSVVPEMLLKVLEPYRR
EGCILNDEMVRLYAGLVDKGSAVRFAFAAAIFGEPMEALFWLQLPRALNYWMKRLTNKSP
ARVPQSASTSELDEVSMLNRISSKGKSGTETGKNNSLGNGQLQLMAFEQEELWGRANEQI
PWHEKLEGEEAIQNRVHELVSIGNLEAAVSLLLSTPPESSYFSANALRAVALSSAVSTSL
LELAVKVVAANMVRTDRSLSGTHLLCAVGRHQEACSQLQDAGCWTDAATLAATHLKGTDY
ARVLLRWAQHVLHSEHNIWRALILYVAAGALPEALASLRGAQQPDTAAMFILACQEIHSE
YLSSLDDELRSSDKLVNLPGLNPESEDVHAVGEYYGQYQRKLVHLCMDSQPFSD
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatacaaattcaaaagccaccaaatgagtcatgggactgtatgttacctggccca
ccttcccggagcaacggtggatccgccgatatttctcccgccggcctattcgcttacgcc
tccggtagctctgtatccgtcgtcgaaactcattcaatgcaactcgttactactatccct
cttccaccaccgtcctcttctactacctcattgtcccctttcatcacttccgtcaggtgg
tccccacagactcttccgcatttaatcgacgtccctcaacatcatcttcttctcgccgtc
ggtgatcgtcaaggacgaatttgtttacttgatttccggtctaaatctccgacaattttc
tttgatactggttcaggttctaaacttgggattcaggatctatgttgggtacaaactgga
ccggattcatggatcttagctgctctatgtggaccttcgttgctttctctgtttaatact
tccacgggtcggtgtttcttcaaatatgatgctgcgccggagtatttctcgtgtctacgt
cgtgatccgtttgattcgcggcatttttgtgcactaggacttaaaggatttttgctttca
gtgactgcattgggagatacagagaatgatgtggtgcttaaggaacttcaaattcgtacg
gatactactgaattgcagaaactagagagggattcatctactggaggtaatggagctccg
gcatcagctacatttccgacctacatctcgaaattcgcattttcaccacactggatgcat
ttgatctttgtggcgtttccgagggaattggtagtgtttgatctgcagtatgagacggcg
ctgttctcgtctgggctgccccggggatgtgggaagtttctggagttgttacctgactcg
aatattgaagttttgtactgtgctcatcttgatggaaagctcagtacttggcggcggaaa
gacggagagcaagtgcacacaatgtgtgtgatggaagaattgatgccctcaataggcaca
gccgttccttccccctcaattcttgcagctgttgtctcccattcagatgccgcctttcaa
actattggcaagctatattccgatgcacatcattcagttgatgtggattttgataatcca
tttgatttttgtgatgaatcccttgttttatctaagacgcgtttgatcaccatttctgat
gatgggaaagtatggaaatggctcctgactgctgaaggatctgtagatattcagaaggac
gtgacaaatccagatattgttgcagaagcctgtaagtctgtaccttcagagattcccatg
ggtcacaactctgagattagcacagttccactgtcaactgatgcaaatagaagcaggacc
tgtctgtcaaagtccactacaagcctggatgaagtgtccttcaagattagtctagttggc
cagcttcatcttctttcttcagcggtgactatgttggctgtaccttctccttctttgact
gctactttgggacgtggaggaaactctccagctgtcgctgttccgcttgttgctgtggga
actcaaagcggtacaatagacgtgattgatgtctctgccaatgctgtcagcgttagcttt
gcagtccataacagtgttgtcaggggattaaggtggcttgggaattcccggctggtttct
ttctcgtactcacagggtacagaaaaagcaggtggctacatcaataggctcgttgtgaca
tgtcttcgaagtggactcaatcgaccatttcgagttctgcagaaaccagagcgagcacct
attagagctttaagggcttcatcttccggcaggtacctattgattttgtttcgtgatgca
ccagtagaagtttgggctatgactaagacaccaatcatgcttagatcactagctctccca
ttcactgtgctagaatggactcttccaacagtaccacggccattgcctaaagatcgtcct
gccgtagcgtcaacagagacatcctccccaacaaaagaagcagttgcagcagcagatgct
aaaggagctgggacagatggatctcaagatgaattttcagaaagtttctcttttgcacta
gtcaatggtgcacttggagtttttgaggttcatggtcgaaggatccgtgacttcagacca
aagtggccttcatcttcatttgtttcatctgagggattggtgacagcaatggcctatcgt
ctgcctcatgtggttatgggcgacaggtcaggaaacattcgctggtgggatgttactact
ggacagtcgtcctcatttaacacccatagggaaggcatccgtagaatcaagttctcacca
gttgttcctggagatcgtagtcgtgggcgtattgctgttctgttttatgataacacattc
tcggtatttgatctggactcacctgatccattagccaattcagttttacaacctcaattt
cctggaactcttgtattggagctcgattggttgcctttgcgatcagataagaatgatcca
ctggtgctatgtattgctggagctgatagcagctttcgccttgttgaagtcaatatgagt
gacaataaaatggtccatggtccacaagctcgaccagtcaaagaaagatttcgaccagtg
cctttgtgttctcccatattactacccacaccacatgccctggcattacgtacaatctta
cagttaggtgtgaagccatcatggtttaatacatggagtacaaccacagatgacgcgaac
caccaagttcctggaactccaacatctggagatcttcgtaaccacatgattgaatcaccc
cgcattggcgattctgtagtgcctgagatgcttctcaaagtactggagccttatcgtaga
gaagggtgcatacttaatgatgagatggttagactctatgctggtctagtggataaaggt
tctgcagtaaggtttgcctttgctgctgctatatttggggaacccatggaagctcttttc
tggctgcaattaccgcgagctctaaactactggatgaaaagattgactaacaagtctcca
gcaagagtccctcaatcagcttccacgtcagaacttgatgaagtatcaatgttaaatagg
atatcatcaaagggaaagtcggggaccgaaacggggaaaaataattctttgggaaatggt
caacttcagctgatggcctttgaacaagaagagttgtgggggcgtgctaatgagcagatt
ccttggcatgaaaagctggaaggagaagaggcaattcaaaaccgtgtacatgaattagta
tcgattggaaacctagaagctgcagttagcttactgctctccacgcctccagagagctca
tatttctctgcaaatgcattgcgtgctgttgccctttcttcagctgtatcgacgtcttta
cttgagctggctgtgaaggttgttgctgccaatatggttagaacagaccggtccttgtct
ggaacacatcttctttgtgccgttggcaggcatcaagaagcttgttctcagttacaagat
gctggatgctggactgatgctgcaacattagctgcaacacatcttaaaggaactgattat
gcaagggttttgctgaggtgggctcagcatgttcttcattctgaacacaacatttggagg
gcactgatcttgtatgttgctgctggtgcactgcctgaggcgttagcttctcttcgtggg
gcacaacaaccagacacagcagccatgtttatactggcttgccaggaaatccatagtgaa
tatctatctagcttggatgatgaattaagatcttcagataagttggttaacttgcctgga
ctgaacccagaaagtgaagatgtccatgcagttggtgaatactatggacaataccagaga
aaactggtccatctttgcatggactcccaacctttctccgactga
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