Solanum stenotomum: 125875736
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Entry
125875736 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125875736
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125875736
03036 Chromosome and associated proteins [BR:
sstn03036
]
125875736
Spliceosome [BR:
sstn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125875736
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
125875736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
HAT_Syf1_M
xRRM
Motif
Other DBs
NCBI-GeneID:
125875736
NCBI-ProteinID:
XP_049412722
LinkDB
All DBs
Position
1:complement(8629782..8653600)
Genome browser
AA seq
858 aa
AA seq
DB search
MAETETLESSPHPPQLSDDNPTGNEDQDMLDADKSAKDLDSDSQSDSDSDSDSEDDAHQN
TQIQALKTELLNNPSNYDTHVQYIKALRKQGDIQKLRQAREAMSAIFPLSSEMWQEWTKD
EISLSSGLNALPTIEKLFDCGVSDYLSVALWCDYLSFVQEHDQSVRTLSAAGISKARNLF
ERALVATGLHVAEGSRIWELYREFEQAIFLTIDETDADSREKQVQRIRNLFHRQLSVPLA
DLCSTLLTYKAWEAEQGANIDVDSSNLDGLSPQVASSYQKSLDMMNARTHLENQISHKVA
PESERLQHFMDYLKFEQSLGDPARIQILYERAITEFPISSELWLTYTHYMDKTLKTSSLV
RDIYKRASRNCPWVGELWVRYLLSLERGRASEDELSAVFEKSLQCTFSSFEEYLDIFLTR
VDGLRRRLSLLTSGAESSNLDYIIIRETLQRASDYLSPHLKNTESFLRMYRYWARLESTL
GKDLVAARGVWEHLLKISGSVLEVWQGYIAMESEMGNINEARSLFKRCYSKRFPGTGSED
ICNSWIRFEREYGELDNFDLAVKKVTPRLEELQLFKLQEAKNVSVSADDGDNSSRKNVRE
KRKPVSNLIEEQSPAKRHKDKAKNVKIISEDGEGHAKEPVKVNNKKPDVAASKSVSGSKK
ENKDVASGKPQQYNDQCTAFVSNLNLKATHDDIRRFFSDVGGVVAIRILTDKFTGKSRGL
AYVDFSDDKHLAAAVAKNKQTLLGKRVSIAKSDPKGRKKGNAAPGTSLRQGDNADQTTES
SKSDAKNYVEGSEDGFQPFSHHRASNIQLKGKNTFAMPRAVRPLGWVDRDKPKPKESDSV
EDENPKSNDEFRKMFIKS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaactgaaaccctagagtcctctcctcatccacctcaactttccgacgacaat
cctaccggaaacgaagaccaagatatgctcgacgccgacaaatccgctaaagatttagat
tctgattctcagtccgactccgactccgactccgattcagaagatgatgcacatcagaat
acacaaattcaagcacttaaaactgagctcttaaataacccttccaattacgacactcat
gtccaatacataaaagctttaaggaagcaaggagatatccagaagcttagacaagctagg
gaagccatgagtgctattttccctttgagttcagagatgtggcaggagtggacaaaagat
gagatctctcttagttcagggctcaatgctctccctacaattgagaagctatttgattgt
ggggtgtccgactatctgtctgttgcgttgtggtgcgactacttaagttttgttcaagag
cacgaccaatcagtccgtacgctttctgcagctggaatttccaaggcaagaaatctgttt
gagcgtgcccttgttgctactggtttgcatgttgctgaaggcagcaggatatgggaatta
taccgggagtttgaacaagcaattttccttactattgatgaaactgatgcagactcgaga
gagaagcaggtccagcgaattaggaatttattccatcgccagttgtctgttcctcttgct
gatctatgttcaactctcctcacatacaaggcttgggaagcagaacaaggagccaatatt
gatgtagactccagtaacttggatggactctcgccacaagttgcctcttcttatcaaaaa
tccctcgacatgatgaatgcgaggactcatcttgagaatcaaatatctcataaagttgca
cctgaatcagaaaggcttcaacactttatggactacttaaaatttgagcaatcattgggg
gatccagcgaggatacagatcttatatgagcgtgccataactgaatttcctatatctagt
gaactctggcttacttatactcactacatggataagacgttgaagacctccagtcttgtt
cgagacatttacaaaagggcatcaaggaactgtccctgggttggagaactgtgggtgcga
tacttgttgtctcttgaacgcggtcgtgcttctgaggacgagctatctgctgtttttgag
aagtctctacagtgcactttctcaagctttgaagagtatcttgatatatttctcacaaga
gttgatggcttaaggcggaggctgtctttattgacatctggagctgaaagcagcaactta
gattatataattatacgggaaactttacagcgtgcatcagattatttgtctccacatctg
aagaatacagaaagttttttgcggatgtacagatattgggcccgcttagaatcaactctg
gggaaagatctagttgcagcccgtggtgtctgggagcacctgcttaaaatcagtggatct
gtgctagaggtgtggcaagggtacatagctatggaaagtgagatgggcaatattaatgaa
gctcgatctctctttaagagatgctacagtaaacggttccctgggactggctcagaggac
atatgcaattcatggattcgcttcgagagagagtatggcgaactggacaattttgacctt
gccgttaaaaaggtcactcctcgccttgaagaactgcagttattcaaactacaagaagct
aagaatgtcagtgtgtctgcagatgatggagacaattcttctaggaaaaatgtgcgtgaa
aagaggaagccagtatctaatttaattgaagaacaatctcctgctaaacgccacaaagat
aaagctaaaaatgttaaaatcatttctgaagatggtgaaggccacgcaaaagaaccggtc
aaggtaaataataaaaaaccagatgtggctgccagcaaatcagtgagtggaagcaaaaaa
gaaaacaaagatgtcgcttcagggaaaccgcaacagtataatgaccagtgtactgcattt
gtatctaaccttaacctcaaggcaacccatgatgacatacgtagattcttcagtgatgtt
ggaggagtggttgctatacgaatattaacagacaagttcactggcaagtcaaggggattg
gcttatgtggatttctcggatgacaaacacctggctgcagccgtggcaaaaaacaaacag
acattgcttgggaagagagtgagcattgctaagtcagatcccaagggcagaaagaaagga
aatgctgctcccggtacgtctttgagacaaggtgataatgctgatcaaactactgagagt
tcaaaatcggatgccaaaaattatgttgaaggttccgaggatgggtttcaaccttttagt
catcaccgggcatctaatatccagctcaaaggtaagaatacgtttgcaatgcccagagct
gtcaggccacttggttgggttgacagagataaacccaaaccaaaagaatctgactctgtg
gaagatgaaaatcctaaatccaatgatgaatttcgaaaaatgttcatcaaatcttga
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